Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0895 ATGGCTCCGTCTTCAGCTTCTGGTCATAGCCTCAAACAGAAGGTGTTCACTTGCCTCACCAAGCTCTCCGACCGCGATACTCAGTCCCTCGCCGCCAATGAGCTCGAGTCCATTGCTCGCAACCTTGATTCAAACTCCGTGCCAGTGTTCCTCTCGTGCATTCACTCCACTAATTCATCGGACAAATCGCCGGTTCGTAAACAATGCGTCCACCTCATGCAGGTTCTTTCCGAAACGCACGGGAACACACTCTCTCCCTATCTTTCCAAAATCCTTGCACATATAGTTCGTCGGCTCCGTGACCCGGACTCGTCGGTTCGATCTGCTTGTGTGAATTCGGTGTCGGCATTGTCCGCACACATCACCAAGCAACCGTTTGCTTCTTTCCTGAAGCCGTTAACTGAGGCTCTGTTCACTGAGCAGGACCAGAACTCACAGTTAGGCGCGGCGCTTTGTCTGGCTTCTGCCATTGATGCAGCCCCTGACCCGGACCCCGCAAGCTTGGCGAAGCTCTTGCCGAGGTTCGAAAAGTTGTTGAGAAGCGCCAGCTTTAAGGCGAAGCCAGCCGCGTTGACGCTTATCGGAAGTGTTATTGAAGCCGGTGGACTGTCCAGTCATGCGGCTTTGAGCAATTCGGTTCCATGCGTGGTGGAATTCTTGAGCAGCAACGACTGGTCGGCAAGGAAGGCTTCGGCCGAGACATTGACGAAGTTGGCGATAGTGGAGAGGGACGTGTTATCAGAATTCAAGGCTGGATGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTTAAGGTAGTTCGGGAGGTTATGAATAATATGTGTGAGGCGTGGAAGCAGATTCCTGATATATCAGATGGATTCTCTCCACCACCTAAATCGCAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGCTATCCGGCTTGCTCACAGAATTCATGTAGTCCTGGTTCTGTTATGCCTCGAGTGTGGAAGAAATCCAATCCAGTTAGCAAATCAAGCCCTGATAGTTCTGTGAGCAATGCTAAAAAGTTAAGCTTTGGTAATAAGAGCATGAGCTCTGGTGTGTTGCCAAAACTAAGCCATAAGAATCGGGATGTTCGAGTTGCTGTCTCAAGTGCTCCCTCTCCTATAGGTTCTTACCAGGGTTATCTTGAAGAGAGAAATGAAATGAAACTGGAAAAAAACAAAAGGGAGAGAAGTAACTTTTCAAGGCCAGAAATGAAACGGCCTCTTCTCAGGAAAAAGCCGGATGAAAGAAAACGCGCATTTGGTGTCTCCAAAACTGGATCTCGTGTAGTTCCATGTCATGAAGCGAGCCAAGATTCAGTTCCTATCATTAATGTTGCTAAAGATTTCCATAGGAATGACAAAGACTCTGATGAGTTAGCTTTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATCTACTTGATCTTCTAGAGAGATTCATGAATAGCTCACAGAATGGGATGCAATCATTAGAGTCTCGTGTACATGGCCTTGAGTTAGCATTGGAAGGGCTCTCTCATGATTTAGCTGTATCAAATAGCAGGGTGACTCATTATGATGCTCCCGGAGATTCTTGCTGCTTGCCGCCTGGTGCCGAAATTCTGAACTCCAAATTCTGGAGGAAAACACAGGGCCGGTATCCATACTCCCAGTTCTCTAGATGTGGTGGTATCCCATCACAAACTGCCATGTGGTACAGAGCTCAGATGAAGGGCGTCGCTGAAACTGAGTTGACAAATCAAAACCGCAGACTCCATGGTGATGGAGGATTCATCACAAATCCGCTGGCAGAAGTGCATACTAACTTATATGCTGCTCAATGTCACCTGCAAGTTTTCATCTTGATTCGATCTTCTATCAGCTTATTGGCAGAAGAAACGAGACCTTCTATCAACTTGTTGGAAGATCTCTTGGTCGGGGAGATTTCCAATCGTTCAGACATTAGATGA 1977 0.4724 MAPSSASGHSLKQKVFTCLTKLSDRDTQSLAANELESIARNLDSNSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDPDSSVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAALCLASAIDAAPDPDPASLAKLLPRFEKLLRSASFKAKPAALTLIGSVIEAGGLSSHAALSNSVPCVVEFLSSNDWSARKASAETLTKLAIVERDVLSEFKAGCLNVFENRRFDKVKVVREVMNNMCEAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPACSQNSCSPGSVMPRVWKKSNPVSKSSPDSSVSNAKKLSFGNKSMSSGVLPKLSHKNRDVRVAVSSAPSPIGSYQGYLEERNEMKLEKNKRERSNFSRPEMKRPLLRKKPDERKRAFGVSKTGSRVVPCHEASQDSVPIINVAKDFHRNDKDSDELALIRSQLFQIEKQQSNLLDLLERFMNSSQNGMQSLESRVHGLELALEGLSHDLAVSNSRVTHYDAPGDSCCLPPGAEILNSKFWRKTQGRYPYSQFSRCGGIPSQTAMWYRAQMKGVAETELTNQNRRLHGDGGFITNPLAEVHTNLYAAQCHLQVFILIRSSISLLAEETRPSINLLEDLLVGEISNRSDIR 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0895 658 MobiDBLite consensus disorder prediction 287 362 - -
Lele20g0895 658 MobiDBLite consensus disorder prediction 290 320 - -
Lele20g0895 658 Coils Coil 497 517 - -
Lele20g0895 658 FunFam TORTIFOLIA1-like protein 3 isoform A 2 356 - -
Lele20g0895 658 Gene3D - 9 376 IPR011989 -
Lele20g0895 658 SUPERFAMILY ARM repeat 13 285 IPR016024 -
Lele20g0895 658 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 587 IPR033337 GO:0005874|GO:0008017
Lele20g0895 658 MobiDBLite consensus disorder prediction 329 360 - -
Lele20g0895 658 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0895 Lele-ChrLele20 15359703 15362709 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1001 17 20793053 20795484 Lele20g0895 20 15359703 15362709 hybridization
Lele18g0534 18 3153320 3156165 Lele20g0895 20 15359703 15362709 hybridization