Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0534 ATGGCTCCGTCTTCAGCTTCTGGTCATAGCCTCAAACAGAAGGTGTTCACTTGCCTCACCAAGCTCTCCGACCGCGATACTCAGTCCCTCGCCGCCAATGAGCTCGAGTCCATTGCTCGGAACCTTGATTCAAACTCCGTGCCAGTGTTCCTCTCCTGCATTCACTCCACTAATTCATCGGACAAATCGCCGGTTCGTAAACAATGCGTACACCTCATGCAGGTTCTTTCCGAAACGCACGGGAACACACTCTCTCCCTATCTTTCCAAAATCCTTGCACATATAGTTCGTCGGCTCCGTGACCCGGACTCGTCGGTTCGATCTGCTTGTGTGAATTCGGTGTCGGCATTGTCCGCACACATCACCAAGCAACCGTTTGCTTCTTTCCTGAAGCCGTTAACTGAGGCTCTGTTCACTGAGCAGGACCAGAACTCACAGTTAGGCGCGGCGCTTTGTCTGGCTTCTGCCATTGATGCAGCCCCTGACCCGGACCCCGCAAGCTTGGCGAAGCTCTTGCCGAGGTTCGAGAAGTTGTTGAGAAGCGCGAGCTTTAAGGCGAAGCCAGCCGCGTTGACGCTTATCGGAAGTGTTATTGAAGCCGGTGGACTGTCCAGTCATGCTGCTTTGAGCAATTCGGTTCCATGCATGGTGGAATTCTTGAGCAGCAACGACTGGTCGGCAAGGAAGGCTTCGGCCGAGACATTGACGAAGTTGGCGATAGTGGAGAGGGACTTGTTATCAGAATTCAAGGCTGGATGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTTAAGGTAGTTCGGGAGGTTATGAATAACATGTGTGAGGCGTGGAAGCAGATTCCTGATATATCAGATGGATTCTCTCCACCACCTAAATCGCAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGCTATCCGGCTTTCTCACAGAATTCATGTAGTCCTGGTTCTGTTATGCCTCGATTGTGGAAGAAATCCAATCCAATTAGCAAATCAAGCCCTGATAGTTCTTCTGTGACCAATGCTAAAAAGTTAAGCTTTGGTAATAAGAGCATGACCTCTAGTAATAAGAATAGGGATGTTCGAGTTGCTGTATCAAATGCTCCCTCTCCTATAGGTTCTTACCAGGGTTATCTTGAAGAGAGAAATGAAATGAAACTGGAAAAAACCAAAAGGGAGAGAATTAACTTTTCAAGGCCAGAACTGAAACGGCCTCTTCTCAGGAAAAAGCCGGATGAAAGAAAACTCACGTTTGGTGTCTCCAAAACTGGATCTCGTGTAGTTCCATGTCATGAAGAGAGCCAAGATTCAGTTCCCATCATTAATGTTGCTAAAGATTTCCATAGGAATGACAAACACTGTGATGAGTTAGCTTTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATCTACTTGATCTTCTAGAGAGATTCATGAATAGCTCACAGAATGGGATGCAATCATTAGAGTCTCGTGTACATGGCCTTGAGTTAGCATTGGAAGGGCTCTCTCATGATTTAGCTGTATCCAATAGAAGGGTGACTCATTATGATGCTCCCGGAGATTCTTGCTGCTTGCCGCCTGGTGCCGAAATTCTGAGCTCCAAATTCTGGAGGAAAACACAGGGCCGGTATCCATACTCCCAGTTCTCTAGATGTGGTGGCATCCCATCACAAACTGCCATGTGGTACAGAGCTCAGATGAAGGGCGTCGCTGAAACTGAGTTGGCAAATCAAAACCGCAGACTCCATGGTGATGGAGGATTCATCACAAATCCTCTGGCAGAAGTTCATACTAACTTATATGCTGCTCAATATGACCTGCAAGTTTTCATCTTCATTCGATCTTCTATCAGCATATTGGCAGAAGAAACGAGACCTTCTATCAACTTGTTGGAAGATCTCTTGGTCGGGGAGTGTCCACGGCTTACTCTTTTGTTTGATGATTAA 1968 0.4675 MAPSSASGHSLKQKVFTCLTKLSDRDTQSLAANELESIARNLDSNSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDPDSSVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAALCLASAIDAAPDPDPASLAKLLPRFEKLLRSASFKAKPAALTLIGSVIEAGGLSSHAALSNSVPCMVEFLSSNDWSARKASAETLTKLAIVERDLLSEFKAGCLNVFENRRFDKVKVVREVMNNMCEAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCSPGSVMPRLWKKSNPISKSSPDSSSVTNAKKLSFGNKSMTSSNKNRDVRVAVSNAPSPIGSYQGYLEERNEMKLEKTKRERINFSRPELKRPLLRKKPDERKLTFGVSKTGSRVVPCHEESQDSVPIINVAKDFHRNDKHCDELALIRSQLFQIEKQQSNLLDLLERFMNSSQNGMQSLESRVHGLELALEGLSHDLAVSNRRVTHYDAPGDSCCLPPGAEILSSKFWRKTQGRYPYSQFSRCGGIPSQTAMWYRAQMKGVAETELANQNRRLHGDGGFITNPLAEVHTNLYAAQYDLQVFIFIRSSISILAEETRPSINLLEDLLVGECPRLTLLFDD 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0534 655 MobiDBLite consensus disorder prediction 290 320 - -
Lele18g0534 655 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 585 IPR033337 GO:0005874|GO:0008017
Lele18g0534 655 MobiDBLite consensus disorder prediction 287 364 - -
Lele18g0534 655 Gene3D - 9 351 IPR011989 -
Lele18g0534 655 FunFam TORTIFOLIA1-like protein 3 isoform A 2 357 - -
Lele18g0534 655 SUPERFAMILY ARM repeat 13 278 IPR016024 -
Lele18g0534 655 Coils Coil 492 512 - -
Lele18g0534 655 MobiDBLite consensus disorder prediction 329 364 - -
Lele18g0534 655 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0534 Lele-ChrLele18 3153320 3156165 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0534 18 3153320 3156165 Lele19g0559 19 3214889 3217262 hybridization
Lele18g0534 18 3153320 3156165 Lele20g0895 20 15359703 15362709 hybridization