Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1001 ATGGCTCCCTCTTCAGCTTCGGGTCATAGCCTCAAACAGAAGGTGTTCACTTGCCTCACCAAGCTCTCCGACCGCGATACTCAGTCCCTCGCCGCCAATGAGCTCGAGTCCATTGCTCGGAACCTTGATTCAACCTCCGTGCCGGTGTTCCTCTCGTGCATTCACTCCACCAATTCATCGGACAAATCGCCGGTTCGTAAACAATGCGTACACCTCATGCAGGTTCTTTCCGAAACGCACGGAAACACACTCTCTCCCTATCTTTCCAAAATCCTTGCACATATAGTTCGCCGGCTCCGTGACCCGGACTCGTCGGTTCGATCTGCTTGTGTAAATTCGGTGTCGGCATTGTCTGCACACATCACCAAGCAACCGTTTGCTTCTTTCCTGAAGCCGTTAACTGAGGCTCTGTTCACTGAGCAGGACCAGAATTCACAGTTAGGCGCGGCGCTTTGTTTAGCTTCTGCCGTTGATGCAACCCCTGACCCGGACCCCGCGAGCTTGGCGAAGCTCTTGCCAAGGTTCGAGAAGTTGTTGAGAAGCGGGAGCTTTAAGGCCAAGCCGGCGGTGTTGACGCTTATCGGAAGTGTTATTGAAGCCGGTGGACTGTCCAGTCATGCGGCTTTGAGCAATTTGGTTCCAGGCATGGTGGAATTCTTGAGCAGTAACGACTGGTCGGCAAGGAAGGCTTCGGCGGAGACATTGACGAAGTTGGCGATAGTGGAGAGGGATGTGTTATCAGAATTCAAGGCTGGATGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTAAAGGTAGTTCGGGAGGTTATGAATCATATGCGTGAGGCATGGAAGCAGATTCCTGATATATCGGATGGATTCTCTCCACCACCTAAATCACAATCTTCTTCCTCAGAAAATGTAAGTGACGGGCGCTATCCGGCATTCTCACAGAATTCATGTAGTCCTGGTTCTGTAATGCCTCGATTGAGGAAGAAATCCAATCCAGTTAGCAAATCAAGCCCTGATAGTTCTTCTGTGAGCAATGCTAAGAAGTTAAGCTTTGGTAACAAGAGAACGAGCTCAAGTGTGTTGCCAAAACTAAGCCATAAGAATCGGCATGTTCAAGTTGCTGTATCAAGTTCTCCCTCTCCTATAGGTGCTTACCAGAGTTATTTTGAAGAGAGAAATGAAATGAAACTGGACAAGAACAAAAAGGAGAAAAGTAACTTTTCAAGGCCAGAACTGAAACGGCCTCTTCTTAGTAAAAAGCCTGATGAAAGAAAACGCACGTTTGGTGGCTCCAAAACTGGATCTCGTGTAGTTCCATATCATGAAGAGAGCCAAGATTCAGTTCCTATCAGTAATGTTGCTAAAGATTTCCATAGGAATGACAGAGACTGTGGCGAGTTAGCTTTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATCTACTTAATCTATTAGAGAGATTCATGAATAGCTCACAGAATGGAATGCAATCATTAGAGTGTCGTGTACATGGCCTTGAGTTAGCATTGGAAGGGCTCTCTCATGATTTCGCTGTATCAAATAAAAGGGTGACTCATTTTGATGCTCCCGGAGATTCCTGCTGCTTGCCACCCGGTGCCGAATTTCTCAACTCCAAATTCTGGAGGAAAACACAGGGCCGGTACCCATACTCCCAGTTCTCTAGATGTCGTGGCACCCCATCACAAGCTGCCATGTGGTACAGAGCTCAAATGAAAGGTGATGCTGAAACTGAGTTCACAAATCAAAACCGCAGACTCCATGGTGATGGAGGATTCATCACAAATCCGCTGGCAGAAGTTCATACTAACTTGCCAGATACAAGACTTGGTGCGTGA 1863 0.4724 MAPSSASGHSLKQKVFTCLTKLSDRDTQSLAANELESIARNLDSTSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDPDSSVRSACVNSVSALSAHITKQPFASFLKPLTEALFTEQDQNSQLGAALCLASAVDATPDPDPASLAKLLPRFEKLLRSGSFKAKPAVLTLIGSVIEAGGLSSHAALSNLVPGMVEFLSSNDWSARKASAETLTKLAIVERDVLSEFKAGCLNVFENRRFDKVKVVREVMNHMREAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCSPGSVMPRLRKKSNPVSKSSPDSSSVSNAKKLSFGNKRTSSSVLPKLSHKNRHVQVAVSSSPSPIGAYQSYFEERNEMKLDKNKKEKSNFSRPELKRPLLSKKPDERKRTFGGSKTGSRVVPYHEESQDSVPISNVAKDFHRNDRDCGELALIRSQLFQIEKQQSNLLNLLERFMNSSQNGMQSLECRVHGLELALEGLSHDFAVSNKRVTHFDAPGDSCCLPPGAEFLNSKFWRKTQGRYPYSQFSRCRGTPSQAAMWYRAQMKGDAETEFTNQNRRLHGDGGFITNPLAEVHTNLPDTRLGA 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1001 620 MobiDBLite consensus disorder prediction 329 377 - -
Lele17g1001 620 MobiDBLite consensus disorder prediction 290 320 - -
Lele17g1001 620 MobiDBLite consensus disorder prediction 395 429 - -
Lele17g1001 620 MobiDBLite consensus disorder prediction 395 443 - -
Lele17g1001 620 SUPERFAMILY ARM repeat 13 285 IPR016024 -
Lele17g1001 620 FunFam TORTIFOLIA1-like protein 3 isoform A 2 357 - -
Lele17g1001 620 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 572 IPR033337 GO:0005874|GO:0008017
Lele17g1001 620 MobiDBLite consensus disorder prediction 283 377 - -
Lele17g1001 620 Pfam HEAT repeat 91 120 IPR000357 GO:0005515
Lele17g1001 620 Gene3D - 9 373 IPR011989 -
Lele17g1001 620 ProSiteProfiles HEAT repeat profile. 91 129 IPR021133 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1001 Lele-ChrLele17 20793053 20795484 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1001 17 20793053 20795484 Lele19g0559 19 3214889 3217262 hybridization
Lele17g1001 17 20793053 20795484 Lele20g0895 20 15359703 15362709 hybridization