Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0883 ATGTATAAATTAAGTTCTTGCATCCCATTTTTGAGGTTTCGGTGCGGGTTGCTAAAATCAGAAATGAAGAGAGGCAGATTGGTCAAGTTAGATACTTTTGTATCATTGACAAGGCAGAGATCCATTCAGATTCTGATTGGAGTTGGGCTTTTGTATATGCTGTTGGTCACAGTGGAAATCCCCTTTGTATTCAAAACTGGGTTTAGTTCTGTGTCTCAGGAGTTCTTAACTCGCCCTTCTAGGCTCGAGAGCGAGGAGGACTTGGAAGAAAGAGATGCCCCTTCTCGTCCGCTGGAAAGAGTTTCTGTAAATGCTTATCAGCCGATTCCGAGTCAACTCGCTGAGCATAAGATTCTTTCAGGGTTGATCTTCGATAACAGTACATTCGAATTACGCGGTAAGGATGGGTCTCTGGAGCTTTACAAGTCAGCTAAGAATGCTTGGAAAGTGGGGAAGAAAATTTGGGATGAGCTAGAATCCGGGAAATCGCGAGCCGCCGGCAAGAAATCCGAGAACCGATCGGACTCGTGCCCACGATCGATTTCGTTGTCCGGGTCGGAGTTTTTGGCCCATGGGCGACTCATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACTGTTGTGGCAAAGCCGTTGGCGGCGCACGCAGAGTTCGAGCCGAATATATCTTTGGCGAAGGATGACGATGAACCGGTGTTGGTTTCACAGTTCATGATGGAGTTGCAGGGTCTGAAAACAGTGGACGGCGAGGAACCCCCAAGGGTTTTGCATTTTAATCCCAGATTGAAAGGAGATTGGAGTGGTAAGCCTGTGATTGAGCTCAACACCTGTTACCGAATGCAGTGGGGTTCGGCGCTTCGATGTGATGGTTGGAAATCGAAGGCTGAAGAAGAGACCGTTGATGGGCTGGTGAAGTGTGAGAAGTGGATTCGGGATAATGACAATAACGCGGAGGAGTCAAAGGCTAGATGGTGGTTGAATAGACTGATAGGCCGGACCAAGAAAGTTTCAGTTGAATGGCCATTCCCATTTTCTGAGAGCAAGCTGTTTGTTCTCACTCTTAGTGCTGGATTGGAGGGTTATCATATTAATGTTGATGGGAGGCATGTGGCATCTTTTCCTTATCGAACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGAGTGGGGACATTGATGTCCACTCTGTGTTTGCCGCCTCTTTGCCTTCAGCCCATCCGAGTTTCGCCCCTCAAAAGCATCTTGATTGGTCCGCTAGATGGCGTGCGCCTCCTCTTCCAAATTTTGATGTTGAGATGTTCATTGGAATCCTTTCTGCTGGAAATCACTTTGCTGAGAGGATGGCTGTAAGAAAGTCATGGATGCAACATAGGCTGATCAAATCTTCAAAAGTGGTGGCCCATTTCTTTGTAGCACCGCATCCCAGAAAAGAAGTAAATGCAGAGTTAAAGAAGGAAGCAGAATACTTTGGTGACATTGTTGTGGTGCCCTACATGGATAATTATGACCTTGTTGTGCTGAAAACAGCAGCCATTTGCGAATATGGGGTTCGCACAGTTTCTGCCAAGTATGTCATGAAGGTTGATGATGACACTTTTGTAAAAGTGGACACTGCATTGAATTTAGCAAGGAACTTTCCGGATGACAAGAGCTTCTATATTGGGAACATAAACTACTACCACAAGCCCTTACGCTATGGCAAATGGGCTGTGACATACGAGGAATGGCCTGAAGAGGATTATCCACCCTATGCTAATGGACCTGGATATATTCTGTCATCTGACATCGCACGGTTTGTCGTATCTGAATTCGAAAGGCATAAATTAAGGTTGTTTAAAATGGAAGACGTAAGTATGGGAATGTGGGTAGAGCAATTCAACAAGACGAAACCAGTGGAGTATTTGCATAGCTTGAAGTTCTGCCAATTCGGTTGCATAGAAGAGTACTACACAGCTCATTACCAATCGCCAAGGCAGATGATGTGCATGTGGGATAAATTGCAGCGACAAACAACCCCTCAATGCTGCAACATGAGATGA 2049 0.4588 MYKLSSCIPFLRFRCGLLKSEMKRGRLVKLDTFVSLTRQRSIQILIGVGLLYMLLVTVEIPFVFKTGFSSVSQEFLTRPSRLESEEDLEERDAPSRPLERVSVNAYQPIPSQLAEHKILSGLIFDNSTFELRGKDGSLELYKSAKNAWKVGKKIWDELESGKSRAAGKKSENRSDSCPRSISLSGSEFLAHGRLMVLPCGLTLGSHITVVAKPLAAHAEFEPNISLAKDDDEPVLVSQFMMELQGLKTVDGEEPPRVLHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKAEEETVDGLVKCEKWIRDNDNNAEESKARWWLNRLIGRTKKVSVEWPFPFSESKLFVLTLSAGLEGYHINVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSAHPSFAPQKHLDWSARWRAPPLPNFDVEMFIGILSAGNHFAERMAVRKSWMQHRLIKSSKVVAHFFVAPHPRKEVNAELKKEAEYFGDIVVVPYMDNYDLVVLKTAAICEYGVRTVSAKYVMKVDDDTFVKVDTALNLARNFPDDKSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARFVVSEFERHKLRLFKMEDVSMGMWVEQFNKTKPVEYLHSLKFCQFGCIEEYYTAHYQSPRQMMCMWDKLQRQTTPQCCNMR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0883 682 FunFam Hydroxyproline O-galactosyltransferase 427 670 - -
Lele20g0883 682 CDD GLECT 197 401 IPR001079 GO:0030246
Lele20g0883 682 Pfam Galactosyltransferase 449 629 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele20g0883 682 FunFam Hydroxyproline O-galactosyltransferase GALT2 317 401 - -
Lele20g0883 682 SUPERFAMILY Concanavalin A-like lectins/glucanases 195 401 IPR013320 -
Lele20g0883 682 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 394 631 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele20g0883 682 Gene3D - 432 680 - -
Lele20g0883 682 Pfam Galactoside-binding lectin 193 401 IPR001079 GO:0030246
Lele20g0883 682 FunFam Hydroxyproline O-galactosyltransferase GALT4 192 310 - -
Lele20g0883 682 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 193 403 IPR001079 GO:0030246
Lele20g0883 682 Gene3D - 194 401 - -
Lele20g0883 682 SMART Gal_bind_lectin_2 197 402 IPR001079 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0883 Lele-ChrLele20 15300133 15303805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0883 26 682 Glycosyltransferase AT1G74800 66.319 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0989 17 20731755 20735094 Lele20g0883 20 15300133 15303805 hybridization
Lele18g0544 18 3205171 3208253 Lele20g0883 20 15300133 15303805 hybridization