Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0544 ATGAAGAGAGGCAGATTGGTCAAGTTAGATACTTTTGTATCATTGACAAGGCAGAGATCCATTCAGATTCTGATTGGAGTTGGGATTTTGTATATGCTGTTGGTCACAGTGGAAATCCCCTTTGTATTCAAAACTGGGTTTAGTTCTGTGTCTCAGGAGTTCTTAACTCGCCCTTCTAGGCTCGAGAGCGAGGAGGATTTGGAAGAAAGAGATTCCCCTTCTCGCCCGCTGGAAAGAGTTTCTGTAAACGGTTTCCAACCGATTCCGAGTCAACTCGCTGAGCACAAGATTCTTTCAGGATTGATCTTCGATAACAGTACATTCGATTTACGCGGTAAGGATGGGTCTCTGGAGCTTTACAATTCAGCTAAGAATGCTTGGAAAGTGGGGAAGAAAATTTGGGATGAGCTAGAATCCGGGCAATCGCGAGCCGCCGCCAAGAAATCCGAGAACCGATCGGATTCGTGCCCGCGATCGATTTCGTTGTCCGGGTCGGAGTTTTTGGCCCATGAGCGACTCATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACTGTTGTGGCAAAGCCGTTGGCGGCGCACGCAGAGTTCGAGCCGAATATATCTTTGGCGAAGGATGACGATGAACCGGTGATGGTGTCACAGTTCATGATGGAGTTGCAGGGTCTGAAAACAGTGGACGGCGAGGAACCCCCAAGGGTTTTGCATTTTAATCCCAGATTGAAAGGAGATTGGAGTGGTAAGCCTGTGATTGAGCTCAACACCTGTTACCGAATGCAGTGGGGTTCGGCGCTTCGATGTGATGGTTGGAAATCGAAGGCTGAAGAAGAGACCGTTGATGGGCTGGTGAAGTGTGAGAAGTGGACTCGGGATAATGACAATCACGCGGAGGAGTCGAAGGCTAGATGGTGGTTGAATAGACTGATAGGCCGGACTAAGAAAGTTTCAGTTGAATGGCCATTCCCATTTTCTGAGAGCAAGCTGTTTGTTCTCACTCTTAGTGCTGGATTGGAGGGTTATCATATTAATGTTGATGGGAGGCATGTGGCATCTTTTCCTTATCGAACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGAGTGGGGACATTGATGTCCACTCTGTGTTTGCCGCCTCTTTGCCTTCAGCCCATCCGAGTTTCGCCCCTCAAAAGCATCTTGATTGGTCAGCTAGATGGCGTGCGCCTCCTCTTCCAAATTTTGATGTTGAGATGTTCATTGGAATCCTTTCTGCTGGAAATCACTTTGCTGAGAGGATGGCTGTAAGAAAGTCATGGATGCAACATAGGCTGATCAAATCTTCAAAAGTGGTTGCCCGTTTCTTTGTAGCACCGCATCCCAGAAAAGAAGTAAATGCAGAGTTAAAGAAGGAAGCAGAATACTTTGGTGACATTGTTGTGGTGCCCTACATGGATAATTATGACCTTGTTGTGCTGAAAACAGCGGCCATTTGCGAATATGGGATTCGCACAGTTTCTGCCAAGTATGTCATGAAGGGTGATGATGACACTTTTGTAAAAGTGGAGGCTGTATTGAATTTAGCAAGGAACTTTCCGGATGACAAGAGCTTCTATATTGGGAACATAAACTACAACCACAAGCCCTTGCGCTATGGCAAATGGGCTGTGACATACGAGGAATGGCCTGAAGAGGATTATCCACCCTATGCTAATGGACCTGGTTATATTCTGTCGTCTGATATCGCACGCTTTGTCGTATCTGAATTCGAAAGGCATAAATTAAGGTTGTTTAAAATGGAAGACGTAAGTATGGGAATGTGGGTAGAGCAATTCAACAAGACTAAACCAGTGGAGTATTTGCATAGCTTGAAGTTCTGCCAATTCGGTTGCATAGAAGAGTACTACACAGCTCATTACCAATCGCCAAGGCAGATGATGTGTATGTGGGATAAATTGCAGCGACAAACAACCCCTCAATGCTGCAACATGAGATGA 1986 0.4617 MKRGRLVKLDTFVSLTRQRSIQILIGVGILYMLLVTVEIPFVFKTGFSSVSQEFLTRPSRLESEEDLEERDSPSRPLERVSVNGFQPIPSQLAEHKILSGLIFDNSTFDLRGKDGSLELYNSAKNAWKVGKKIWDELESGQSRAAAKKSENRSDSCPRSISLSGSEFLAHERLMVLPCGLTLGSHITVVAKPLAAHAEFEPNISLAKDDDEPVMVSQFMMELQGLKTVDGEEPPRVLHFNPRLKGDWSGKPVIELNTCYRMQWGSALRCDGWKSKAEEETVDGLVKCEKWTRDNDNHAEESKARWWLNRLIGRTKKVSVEWPFPFSESKLFVLTLSAGLEGYHINVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSAHPSFAPQKHLDWSARWRAPPLPNFDVEMFIGILSAGNHFAERMAVRKSWMQHRLIKSSKVVARFFVAPHPRKEVNAELKKEAEYFGDIVVVPYMDNYDLVVLKTAAICEYGIRTVSAKYVMKGDDDTFVKVEAVLNLARNFPDDKSFYIGNINYNHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARFVVSEFERHKLRLFKMEDVSMGMWVEQFNKTKPVEYLHSLKFCQFGCIEEYYTAHYQSPRQMMCMWDKLQRQTTPQCCNMR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0544 661 FunFam Hydroxyproline O-galactosyltransferase GALT2 296 380 - -
Lele18g0544 661 Gene3D - 411 659 - -
Lele18g0544 661 SUPERFAMILY Concanavalin A-like lectins/glucanases 174 380 IPR013320 -
Lele18g0544 661 FunFam Hydroxyproline O-galactosyltransferase 406 649 - -
Lele18g0544 661 FunFam Hydroxyproline O-galactosyltransferase GALT4 171 289 - -
Lele18g0544 661 Pfam Galactoside-binding lectin 172 380 IPR001079 GO:0030246
Lele18g0544 661 SMART Gal_bind_lectin_2 176 381 IPR001079 GO:0030246
Lele18g0544 661 MobiDBLite consensus disorder prediction 61 80 - -
Lele18g0544 661 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 382 IPR001079 GO:0030246
Lele18g0544 661 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 363 610 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele18g0544 661 CDD GLECT 176 380 IPR001079 GO:0030246
Lele18g0544 661 Gene3D - 172 380 - -
Lele18g0544 661 MobiDBLite consensus disorder prediction 61 76 - -
Lele18g0544 661 Pfam Galactosyltransferase 428 608 IPR002659 GO:0006486|GO:0016020|GO:0016758
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0544 Lele-ChrLele18 3205171 3208253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0544 5 661 Glycosyltransferase AT1G74800 66.617 0.0 929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0544 18 3205171 3208253 Lele19g0570 19 3269332 3272446 hybridization
Lele18g0544 18 3205171 3208253 Lele20g0883 20 15300133 15303805 hybridization