Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0989 ATGAAGAGAGGCAGGTCGGTTAAGTTAGATACTTTTGTGTCATTGACAAGGCAGAGATCCATTCAGATTCTCATCGGAGCTGGGCTTTTGTATCTGCTGTTGGTCACCATGGAAATCCCCTTTGTATTCAAAACTGGGTTTAGTTCTGTGTCGCAGGAGTTCTTAACTCGCCCTTCTAGACTTGAGAGCGAGGAGGACTTGGAAGAAAGAGAGGCCCCTTCTCGTCCGCTGGAAGAAGTTTCTGTAAACGCATACCAGCCGATTCCGAGCCAACTCGCCGGGCACAAGATTCTTTCAGGGTTGATCTTTGATAACAGCACATTCGATTTGCGCGGTAAGGATGGGTCTCTGGAGCTTTACAAGTCAGCTAAAAATGCGTGGAAAGTGGGGAAGAAAATTTGGGAGGAGCTAGAATCCGGGAAATTGCGAGCCGCCGCCAAGAAATCCGAGAACCGATGGGATTCGTGCCCGCGATCGATTTCGTTGTCCGGGTCGGAGTTTATGGCCCATGGGCGACTCATGGTTCTTCCTTGTGGACTGACATTGGGGTCCCACATAACTGTTGTGGCAAAGCCGTTGGCGGCTCATGCGGAGTTCGAGCAGAAGATATCTCTGGCGAAGGATGACGATGAACCGGTGATGGTGTCACAGTTCATGATGGAGTTGCAGGGTTTGAAAACAGTGGACGGCGAGGAACCCCCAAGGGTTTTGCATTTTAATCCCAGATTGAGAGGAGATTGGAGTGGGAAGCCTGTGATCGAGCTCAACACCTGTTACCGAATGCAGTGGGGTTCGGCGCTTCGCTGTGATGGTTGGAAATCGAAGGCCGATGAAGAGACCGAGGTGGAATTGCACAATCATGCCTATGATACGGCGTGGTCTGCTCTTTTCATTGATGGGCTGGTGAAGTGTGAGAAGTGGATTCGTGATGATGACAATCACGCAGAGGAGTCCAAGGCTAGATGGTGGTTGAGTAGACTGATCGGCCGGACCAAGAAAGTTTCAGTTGACTGGCCATTCCCATTTTCTGAAAGCAAGCTATTTGTTCTCACTCTTAGTGCTGGATTGGAGGGTTATCATATTAATGTTGATGGGAGGCATGTGGCATCTTTTCCTTATCGCACTGGTTTTACTCTTGAGGATGCCACTGGGCTTTCTTTGAGTGGGGACATTGATGTCCACTCTGTATTTGCTGCCTCTTTGCCTTCAACCCATCCAAGTTTCGCCCCACAGAAGCATCTTGATCGGTCAAGTAGATGGCGTGCGCCTCCTCTTCCAAATTTTGATGTTGAAATGTTCATTGGAATCCTTTCTGCTGGAAATCACTTTGCTGAGCGGATGGCTGTAAGAAAATCATGGATGCAACATAGGCTCATCAAATCTTCAAAAGTGGTGGCCCGTTTCTTTGTAGCACCGCATCCCAGAAAAGCAGTAAATGCAGAGTTAAAGAAGGAAGCAGAATATTTTGGTGACATTGTCGTAGTGCCCTACATGGATAACTATGACCTTGTTGTGCTGAAAACAGCCGCCATTTGCGAATATGGGGTTCGCACAATTTCTGCCAATTATGTCATGAAGGGTGATGATGACACTTTTGTAAAAGTTGACGCCATATTGAATTTAGCAAGGAACTTTCCGGATGACAAGAGCTTCTATATTGGGAACATAAACTACTATCACAAGCCATTGCGCTATGGCAAATGGGCCGTGACATACGAGGAATGGCCTGAAGAGGATTACCCACCCTATGCTAATGGACCTGGTTATATTCTGTCATCTGATATCGCACGCTTCGTCGTATCTGAATTCGAAAGGCATAAATTAAGGTTGTTTAAAATGGAAGACTACAAAATTCAAGCCCTGTAA 1866 0.4716 MKRGRSVKLDTFVSLTRQRSIQILIGAGLLYLLLVTMEIPFVFKTGFSSVSQEFLTRPSRLESEEDLEEREAPSRPLEEVSVNAYQPIPSQLAGHKILSGLIFDNSTFDLRGKDGSLELYKSAKNAWKVGKKIWEELESGKLRAAAKKSENRWDSCPRSISLSGSEFMAHGRLMVLPCGLTLGSHITVVAKPLAAHAEFEQKISLAKDDDEPVMVSQFMMELQGLKTVDGEEPPRVLHFNPRLRGDWSGKPVIELNTCYRMQWGSALRCDGWKSKADEETEVELHNHAYDTAWSALFIDGLVKCEKWIRDDDNHAEESKARWWLSRLIGRTKKVSVDWPFPFSESKLFVLTLSAGLEGYHINVDGRHVASFPYRTGFTLEDATGLSLSGDIDVHSVFAASLPSTHPSFAPQKHLDRSSRWRAPPLPNFDVEMFIGILSAGNHFAERMAVRKSWMQHRLIKSSKVVARFFVAPHPRKAVNAELKKEAEYFGDIVVVPYMDNYDLVVLKTAAICEYGVRTISANYVMKGDDDTFVKVDAILNLARNFPDDKSFYIGNINYYHKPLRYGKWAVTYEEWPEEDYPPYANGPGYILSSDIARFVVSEFERHKLRLFKMEDYKIQAL 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0989 621 CDD GLECT 176 397 IPR001079 GO:0030246
Lele17g0989 621 Gene3D - 315 397 - -
Lele17g0989 621 SUPERFAMILY Concanavalin A-like lectins/glucanases 174 397 IPR013320 -
Lele17g0989 621 Gene3D - 428 619 - -
Lele17g0989 621 Gene3D - 171 295 - -
Lele17g0989 621 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 395 618 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele17g0989 621 SMART Gal_bind_lectin_2 176 398 IPR001079 GO:0030246
Lele17g0989 621 Pfam Galactosyltransferase 445 618 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele17g0989 621 FunFam Hydroxyproline O-galactosyltransferase GALT4 171 288 - -
Lele17g0989 621 Pfam Galactoside-binding lectin 172 397 IPR001079 GO:0030246
Lele17g0989 621 ProSiteProfiles Galactoside-binding lectin (galectin) domain profile. 172 399 IPR001079 GO:0030246
Lele17g0989 621 FunFam Hydroxyproline O-galactosyltransferase GALT2 313 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0989 Lele-ChrLele17 20731755 20735094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0989 8 618 Glycosyltransferase AT1G74800 63.622 0.0 810
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0989 17 20731755 20735094 Lele19g0570 19 3269332 3272446 hybridization
Lele17g0989 17 20731755 20735094 Lele20g0883 20 15300133 15303805 hybridization