Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0855 ATGGCAAGTGTTAGAGGTGGAAGACGTGTTGGAGTCAGAACAAGCTCACGTGCTCCTCTCGTGGAACACATAGTGCCTAATGCTGGATGGACAGAGGACTCCTCCGGCCATTATCTTCTAGTTGATCTTCCTGGATTCAAGAAGGAAGAGGTGAAGCTTCAGGTGGAGAGCTCTGGCTATATCATAATAAGAGGAGAAAGGCAAGTGAACCAAGAGAAACGTGTTCAATTTGAGCTGATTTTTCCAGTTCCAAAGGATTCAGATACTGATAACATAGCTGGCAAATTTGATGGTGAGATCCTTTATGTGACCATCACCAAGAGAGCTGCACAAAGGAACACAGAAACTGAACCAGCTTGGCCTGCAAATGGCAGCGTTAGAAGACAAGAACAACAACACAGTGCTGATGATAATCAACAAAGAGATCACAACAGACAACACGACAGCCATGCGAATGAGGAAACAAGAAATGAAATCGCTCACGTGGGAGGTTTTCCTGAACAGTTGATAAGGAAGTGGGAAAAAGAACCTACCATAGTAACAAGTGCAGTCAAAGTTTTGAGACCGAACAAGGGAATTGTTATCACTGCAGTTTTAGCCTTCTCCTTAGGATTGTTCTTTTCTCACAAGTTTCAATCCACAACAGAAGCATAA 654 0.4343 MASVRGGRRVGVRTSSRAPLVEHIVPNAGWTEDSSGHYLLVDLPGFKKEEVKLQVESSGYIIIRGERQVNQEKRVQFELIFPVPKDSDTDNIAGKFDGEILYVTITKRAAQRNTETEPAWPANGSVRRQEQQHSADDNQQRDHNRQHDSHANEETRNEIAHVGGFPEQLIRKWEKEPTIVTSAVKVLRPNKGIVITAVLAFSLGLFFSHKFQSTTEA 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0855 217 MobiDBLite consensus disorder prediction 130 157 - -
Lele20g0855 217 Pfam Hsp20/alpha crystallin family 31 113 IPR002068 -
Lele20g0855 217 MobiDBLite consensus disorder prediction 112 129 - -
Lele20g0855 217 SUPERFAMILY HSP20-like chaperones 16 113 IPR008978 -
Lele20g0855 217 MobiDBLite consensus disorder prediction 112 158 - -
Lele20g0855 217 Gene3D - 10 114 IPR008978 -
Lele20g0855 217 CDD ACD_sHsps-like 30 107 - -
Lele20g0855 217 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 28 111 - -
Lele20g0855 217 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 123 IPR002068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0855 Lele-ChrLele20 15163778 15164547 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0968 17 20605839 20606672 Lele20g0855 20 15163778 15164547 hybridization
Lele18g0565 18 3335642 3336559 Lele20g0855 20 15163778 15164547 hybridization