Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0968 ATGGCTAGTGTTAGAGGTGGAAGACGGGTTGAAGTCAGAACAAGCTCACGTGCTCCTCTCGTGGAACAGATAGTTCCTAATTCTGCTTGGACAGAGGACTCCTCCGGCCATTATCTTCTAGTTGATCTTCCTGGATTCAAGAAGGAAGAGGTGAAGCTTCAGGTGGAGGGCTCTGGTTATATCATAGTAAGAGGAGAAAGGCAGGTGAACCCAGAGAAAGGGGTTCGATTTGAGCTGATTTTTCCAGTTCCAAAGGATTCAGATACTGATAACATAGCTGGCAAATTTGATGGTGAGATCCTTTATGTGACTATCACCAAAAGATCAGCTGCACAAGAGAACACAGAAACTGAACCAGCTAATATGCCTGCAAATGGAAGTGTTAGGACACAAGAAGAAAATCACAGACGTGATGATAATCAACTAAGAGATCAAAACAGACAACAGGACCGCCATATGAACGAGGAAACAAGAAATGAAGTCACTCACGTGGGTGGTTTTCCTGCAGAGTTGATAAGCAAATGGGAAAAAGAACCTACCATATTAACAAGTGCAGTCAAAGTTTTAAGACAGAACAAGGGAATTGTTATCACTGCTGTTTTAGCCTTTTCCTTAGGATTGTTCGTTTCTCACAAGTTTCAATCCTCAACAGAAGCATAA 660 0.4227 MASVRGGRRVEVRTSSRAPLVEQIVPNSAWTEDSSGHYLLVDLPGFKKEEVKLQVEGSGYIIVRGERQVNPEKGVRFELIFPVPKDSDTDNIAGKFDGEILYVTITKRSAAQENTETEPANMPANGSVRTQEENHRRDDNQLRDQNRQQDRHMNEETRNEVTHVGGFPAELISKWEKEPTILTSAVKVLRQNKGIVITAVLAFSLGLFVSHKFQSSTEA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0968 219 SUPERFAMILY HSP20-like chaperones 18 113 IPR008978 -
Lele17g0968 219 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 29 111 - -
Lele17g0968 219 MobiDBLite consensus disorder prediction 130 159 - -
Lele17g0968 219 Pfam Hsp20/alpha crystallin family 30 114 IPR002068 -
Lele17g0968 219 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 123 IPR002068 -
Lele17g0968 219 MobiDBLite consensus disorder prediction 111 159 - -
Lele17g0968 219 Gene3D - 8 115 IPR008978 -
Lele17g0968 219 CDD ACD_sHsps-like 30 107 - -
Lele17g0968 219 MobiDBLite consensus disorder prediction 111 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0968 Lele-ChrLele17 20605839 20606672 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0968 17 20605839 20606672 Lele19g0592 19 3402150 3402983 hybridization
Lele17g0968 17 20605839 20606672 Lele20g0855 20 15163778 15164547 hybridization