Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0565 ATGCCTGCAAGCCATCCAACAACTCCTTCACCTTCTTCAGGGGAAATCTGCAGATCACAGCATGCATGCAAATGCAATTATATAGCTCATGATCAGCCACAAAAGTTTCATTCTGAATTTTGGTACTTCTTGTTCAACATCAAATCAATGGCAAGTGTTAGAGGTGGAAGACGTGTTGGAGTCAGAACAAGCTCACGTGCTCCTCTCGTGGAACACATAGTGCCTAATGCTGGATGGACAGAGGACTCCTCCGGCCATTATCTTCTAGTTGATCTTCCTGGATTCAAGAAGGAAGAGGTGAAGCTTCAGGTGGAGGGCTCTGGCTATATCATAATAAGAGGAGAAAGGCAAGTGAACCAAGAGAAACATGTTCAATTTGAGCTGATTTTTCCAGTTCCAAAGGATTCAGATACTGATAAAATAGCTGGCAAATTTGACGGTGAGATCCTTCATGTGACCATCACCAAGAGAGCTGCACAAAGGAACACAGGAACTGAACCAGCTTTGCCTGCAAATGGCAGTGTTAGCAGACAAGAACAACAACACAGTGCTGATGATAATCAACAAAGAGATCACAACAGACAACACGACAGCCATGTGAAGGAGGAAACAAGAAATGAAATCACTCACGTGGGAGGTTTTCCTGAACAGTTGATAAGGAAGTGGGAAAAAGAACCTACCATAGTAACAAGTGCAGTCAAAGTTTTGAGACAGAACAAGGGAATTATTATCACTGCAGTTTTAGCCTTCTCCTTAGGATTGTTCGTTTCTCACAAGTTTCAATCCAAAAAAGAAGCATAA 801 0.4245 MPASHPTTPSPSSGEICRSQHACKCNYIAHDQPQKFHSEFWYFLFNIKSMASVRGGRRVGVRTSSRAPLVEHIVPNAGWTEDSSGHYLLVDLPGFKKEEVKLQVEGSGYIIIRGERQVNQEKHVQFELIFPVPKDSDTDKIAGKFDGEILHVTITKRAAQRNTGTEPALPANGSVSRQEQQHSADDNQQRDHNRQHDSHVKEETRNEITHVGGFPEQLIRKWEKEPTIVTSAVKVLRQNKGIIITAVLAFSLGLFVSHKFQSKKEA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0565 266 MobiDBLite consensus disorder prediction 158 207 - -
Lele18g0565 266 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 68 172 IPR002068 -
Lele18g0565 266 SUPERFAMILY HSP20-like chaperones 60 161 IPR008978 -
Lele18g0565 266 CDD ACD_sHsps-like 79 156 - -
Lele18g0565 266 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 76 160 - -
Lele18g0565 266 MobiDBLite consensus disorder prediction 183 207 - -
Lele18g0565 266 MobiDBLite consensus disorder prediction 158 182 - -
Lele18g0565 266 Pfam Hsp20/alpha crystallin family 80 161 IPR002068 -
Lele18g0565 266 Gene3D - 57 162 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0565 Lele-ChrLele18 3335642 3336559 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0565 18 3335642 3336559 Lele19g0592 19 3402150 3402983 hybridization
Lele18g0565 18 3335642 3336559 Lele20g0855 20 15163778 15164547 hybridization