Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0848 ATGTTAGGGGGAGAGAGTGAGAGAGAGAGGGAGGGAGGAGAAAGAGAATCTAGACCTGAGGCACATCGCTACCTGGGCTGGGGCGTTCCTTTGCTGACAGAATCGAGACAGGCTCGTAGTCCACTCGCTCTTTGTGTAATTTGAATTGATGTTTCATTTCTATTTGATGGGTTTAGAACTAAGCAACAAGGCTTTTCTTTTATGAGCAGATCAATAATTTCCAACAGAATGTTGGAGGCTCCTTCCTTTCTTGTTGCAAGGGAGTTACCAAGCTTTTGTGAGGAAGAGAGCAGGTGGATTTACAGTGCTGTTCATGTCATGGAGCTCTCGAACAACAAGCGCAGACTGGAAGATGAAGAACAAATGGTGTTGGGAAAGTCCTGCAAACGTTCAGATGCTCCTGAGGAAGGAGAAACATGGTTGAGAGTGCGTGACCTTTCCCTTTCTCATAATCAAATAAATGACCAAAATCATGCAGGTGATCAGTCAGATTCAAGCTCACTCATCTACCAACTTGGGCGGGATATGTCAATTAACTGTCTTCTTCGTTGCTCAAGGTCTGATTATGGTTCAATTGCCTCAGTGAATCAGAATTTTCGATCTCTCATTCGAAGTGGAGAACTATATAAGCTCAGGCGGCAGTTTGGTATTATAGAACATTGGGTTTACTTCTCTTGCAATCTCATTGAATGGGAGGCTTTTGATCCTAACAATGGTCGATGGATGCGCTTGCCTAGAATGACTTGTAATGAATGCTTTATGTGTTCAGATAAGGAGTCACTTGCTGTTGGTACAGAACTTTTGGTGTTTGGAAAGGAAATCATGTCTCCTGTTATTTACAAATACAGCATATTGACAAACTCATGGTCATCTGCTAAAGAAATGAATACTCCTAGATGCTTATTTGGTTCAGCGAGCCTCGGTGAAATAGCTATACTGGCTGGTGGTTGCGACCCACGAGGCAACATCTTAAGTTCAGCTGAGCTTTATAACTCAGAAACTGGAGATTGGGAGACTCTTCCGAACATGAACAGAGCAAGGAAAATGTGCTCTGGTGTATTTATGGATGGGAAATTTTATGTCATTGGGGGGATTGGAGTAGGCAACACAAGACAGTTGACATCTGGGGAGGAGTTTGATTTGCAGACAAGGAAATGGCGTGAAATACCCAATATGTTCCCCGGTCGATATGGAGGGGCTGGGATAGCTGAGGCACCAGCTGCTGCTGAGGCACCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCCCTACAGGAGGTGAGGAGGTATGATAAAGTCAGGAACTTATGGATCACCATTGGAAGGCTTCCTGAGCGGGCAGCTTCAATGAATGGTTGGGGATTAGCTTTTCGGGCATGTGGAGATAGGCTAATTGTTATTGGTGGGCCTCGGGATTTAAATGTGAGGGCGATTGAAGTTAATGCTTGGGTCCCTGGGGAAGGCGAACCACAGTGGAACCTGCTGGCCAGCAGGCAGTCAGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGCTGA 1554 0.4485 MLGGESEREREGGERESRPEAHRYLGWGVPLLTESRQARSPLALCVIXIDVSFLFDGFRTKQQGFSFMSRSIISNRMLEAPSFLVARELPSFCEEESRWIYSAVHVMELSNNKRRLEDEEQMVLGKSCKRSDAPEEGETWLRVRDLSLSHNQINDQNHAGDQSDSSSLIYQLGRDMSINCLLRCSRSDYGSIASVNQNFRSLIRSGELYKLRRQFGIIEHWVYFSCNLIEWEAFDPNNGRWMRLPRMTCNECFMCSDKESLAVGTELLVFGKEIMSPVIYKYSILTNSWSSAKEMNTPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGDWETLPNMNRARKMCSGVFMDGKFYVIGGIGVGNTRQLTSGEEFDLQTRKWREIPNMFPGRYGGAGIAEAPAAAEAPPLIAVVNNVLYAADYALQEVRRYDKVRNLWITIGRLPERAASMNGWGLAFRACGDRLIVIGGPRDLNVRAIEVNAWVPGEGEPQWNLLASRQSGSFVYNCAVMGC 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0848 517 Pfam Kelch motif 346 392 IPR006652 GO:0005515
Lele20g0848 517 Pfam Kelch motif 298 344 IPR006652 GO:0005515
Lele20g0848 517 SUPERFAMILY Kelch motif 227 514 IPR015915 GO:0005515
Lele20g0848 517 SMART kelc_smart 266 309 IPR006652 GO:0005515
Lele20g0848 517 SMART kelc_smart 310 357 IPR006652 GO:0005515
Lele20g0848 517 SMART kelc_smart 358 406 IPR006652 GO:0005515
Lele20g0848 517 FunFam F-box/kelch-repeat protein SKIP11 214 502 - -
Lele20g0848 517 Gene3D - 213 502 IPR015915 GO:0005515
Lele20g0848 517 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 159 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0848 Lele-ChrLele20 15114423 15117767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0848 172 448 Miscellaneous Gene Families AT4G33900 24.921 2.40e-12 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0959 17 20555240 20561798 Lele20g0848 20 15114423 15117767 hybridization
Lele18g0572 18 3387521 3390770 Lele20g0848 20 15114423 15117767 hybridization