Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0959 ATGCCCAAAAAAGGAAAGAGCTTGAGAAGACAGGACCCAAATGCACAGAAAAGAAAGGCTTTTGATCCTCACAAAGCCCCCCACCGTCTATTTCTTTTACCGGATGAATTTATTGACGAGTCTACTCGCACTTCGTGTAATTTATCAATAATTTCCAACAGAATGTTGGAGGGTCCTTCCTTTCTTGTTGCAAGGGAGTTACCAAGCTCATGTGAGGAAGAGAGCAGGTGGATTTACAGTGCTGTTCATGTAATGGAGCTCTCGAACAACAAGCGCAGACTGGAACATGAAGAACAAATGGTGTTGGGAAAGACCTGCAAACGTGCAGATGCTCTTGAGGAAGGAGAAACATGGTTGAGAGTGCGCGACCTTTCCCTTTCCCATAACCAAACAAGTGACCAAAATCATGCAGGTGATCAGTCAGATTCAAGCTCACTCATCCACCAACTTGGGCGGGACATGTCAATTAACTGTCTCCTTCGTTGCTCAAGGTCTGATTATGGTTCAATTGCCTCAGTGAATCAGAATTTTCGATCTCTCGTTCGTAGTGGAGAACTATATAAGCTCAGGCGGCAGTTTGGTATTATCGAACATTGGGTTTACTTCTCTTGCAATCTCCTTGAGTGGGAAGCATTTGATCCAAACAATGGTCGATGGATGCGCTTGCCTAGAATGACTTGTAATGAATGCTTTATGTGTTCAGATAAGGAGTCGCTTGCCGTTGGTACAGAACTTTTGGTGTTTGGCAAGGAAATCATGTCTCCTGTTATTTACAAATACAGCATATTGACAAACTCGTGGTCATCTGCTAAAGAAATGAATACTCCTAGATGCTTATTTGGTTCAGCGAGCCTCGGTGAAATAGCTATACTGGCTGGTGGTTGTGACCCACGAGGCAACATCTTAAGTTCAGCTGAGCTTTATAACTCAGAAACTGGAAATTGGGAGACTCTTCCAAACATGAACAGAGCAAGGAAAATGTGCTCTGGTGTATTTATGGACGGGAAATTTTATGTCATTGGGGGGATCGGAGTAGGCAACACTAGACAGTTGACATCTGGTGAGGAGTTTGATTTGCAGACAAGGAAATGGCGTGAAATACCCAATATGTTCCCTGGTCGATATGGAGGGCCTGGGATAGCTGAGGCACCGGCTGCTGCTGAGGCACCTCCTTTAATTGCAGTTGTAAATAATGTATTGTATGCTGCAGATTATGCTCTACAGGAGGTAAGGAGGTATGATAAAGCCAGGAACTTATGGGTTACCATTGGAAGGTTACCTGAGCGGGCAGCTTCTATGAATGGTTGGGGATTAGCTTTTCGGGCATGTGGAGATAGGCTAATCGTTATTGGTGGGGCTCGGGATTTAAATGTGAGGGCAATTGAAGTTAATGCTTGGGTCCCTGGGGAAGGCGAACCACAGTGGAACCTGCTGGCCAGCAGACAGTCAGGGAGCTTTGTGTATAATTGTGCTGTGATGGGATGCTGA 1488 0.4509 MPKKGKSLRRQDPNAQKRKAFDPHKAPHRLFLLPDEFIDESTRTSCNLSIISNRMLEGPSFLVARELPSSCEEESRWIYSAVHVMELSNNKRRLEHEEQMVLGKTCKRADALEEGETWLRVRDLSLSHNQTSDQNHAGDQSDSSSLIHQLGRDMSINCLLRCSRSDYGSIASVNQNFRSLVRSGELYKLRRQFGIIEHWVYFSCNLLEWEAFDPNNGRWMRLPRMTCNECFMCSDKESLAVGTELLVFGKEIMSPVIYKYSILTNSWSSAKEMNTPRCLFGSASLGEIAILAGGCDPRGNILSSAELYNSETGNWETLPNMNRARKMCSGVFMDGKFYVIGGIGVGNTRQLTSGEEFDLQTRKWREIPNMFPGRYGGPGIAEAPAAAEAPPLIAVVNNVLYAADYALQEVRRYDKARNLWVTIGRLPERAASMNGWGLAFRACGDRLIVIGGARDLNVRAIEVNAWVPGEGEPQWNLLASRQSGSFVYNCAVMGC 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0959 495 SUPERFAMILY Kelch motif 205 492 IPR015915 GO:0005515
Lele17g0959 495 Gene3D - 191 483 IPR015915 GO:0005515
Lele17g0959 495 MobiDBLite consensus disorder prediction 1 23 - -
Lele17g0959 495 FunFam F-box/kelch-repeat protein SKIP11 192 480 - -
Lele17g0959 495 Pfam Kelch motif 324 370 IPR006652 GO:0005515
Lele17g0959 495 Pfam Kelch motif 276 322 IPR006652 GO:0005515
Lele17g0959 495 SMART kelc_smart 288 335 IPR006652 GO:0005515
Lele17g0959 495 SMART kelc_smart 244 287 IPR006652 GO:0005515
Lele17g0959 495 SMART kelc_smart 336 385 IPR006652 GO:0005515
Lele17g0959 495 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 136 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0959 Lele-ChrLele17 20555240 20561798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0959 150 426 Miscellaneous Gene Families AT4G33900 24.921 3.51e-12 66.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0959 17 20555240 20561798 Lele19g0600 19 3454974 3457553 hybridization
Lele17g0959 17 20555240 20561798 Lele20g0848 20 15114423 15117767 hybridization