Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0725 ATGAAACAACGGTGCTCTCTGTCTCTGCTTGGGTCGAGTAGGGACCTCGGGCCCCGAATTTCCTCGTCTGATCCGGGTGTGGGAGCCTCTGCTCTCGTGCCTTGCTTGTTTGGTTGCCTGCGAATTGAAGCTTTAGTACTCAATATGGTGGCCTCTGCTGCTACATCTTCGTTTTTCCCTGTTACTTCACCCTCACCAGACTCTGGTGCGAAGAGTACCAAACTTGGTGGTGGGCTCAGAGGACTTAAATCCAAATCTACAACTTCTGGTGGCTTGCAAGTTAAGGCAAATGCTCAAGCCCCACCAAAGATTAATGGAGTTACTACATCTTTGGAAAGTGTGAAACATGAAAACGATGCCCCATCATCCTCCCCAAGGACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTAGCAGCCATCACAACAATTTTCTTGGCAGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAAGCGACCTGACATGCTTATGGATCCGTTCGGTATAGGAAAAATTGTTCAGGATGGTCTTGTGTTTCGGGAGAACTTTTCTATCAGGTCCTATGAAATAGGTGCTGATCGAACTGCATCTATTGAGACGTTAATGAACCATTTGCAGGAAACTGCCCTTAATCATGTTAAGAGTTCTGGGCTTCTTGGCGACGGCTTTGGTTCTACACAAGAGATGTGTAAAAAGAACTTGATATGGGTGGTTGCTCGGATGCAGGTTGTGGTTGATCGTTATCCTACATGGGGCGATGTTGTTCAAGTAGACACTTGGGTTTCTGCTTCGGGGAAGAATGGCATGCGTCGTGATTGGGTTGTGCGGGACTGCAAAACTGGTGAAACATTGACGAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAGGCTATCTAAAATACCAGAAGAAGTTAGAGAAGAGATAGGGCCCTACTTTGTGAATTCTGATCCTGTTGTAGAAGAGGATAACAGGAAACTGCCTAAACTTGATGACAACACAGCAGGCTATAAGCGGACAGGCTTGAGCCCGCGGTGGAGTGACTTAGATGTCAACCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCACAGTCGATTCTGGAGAGCCACGAGCTCTGCTCCATGACTCTGGAGTACCGGAGGGAGTGTGGCAGGGACAGTGTACTGCATTCACTGACAGCTATATCTAGCGCCGATGTAGGTAATTTAGCTCTAAGCGGAGGTTTAGAGTGCAAGCATTTCCTTAGGCTTGAAGATGGTGCTGAGATTGTGAGAGGCAGGACAGAGTGGAGGCCAAAACACCCCAACAACTTGGGTGCCAAAAATCAGATTCCAGAAGAAAGCACCTAG 1386 0.4762 MKQRCSLSLLGSSRDLGPRISSSDPGVGASALVPCLFGCLRIEALVLNMVASAATSSFFPVTSPSPDSGAKSTKLGGGLRGLKSKSTTSGGLQVKANAQAPPKINGVTTSLESVKHENDAPSSSPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLMDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETLMNHLQETALNHVKSSGLLGDGFGSTQEMCKKNLIWVVARMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWVVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVREEIGPYFVNSDPVVEEDNRKLPKLDDNTAGYKRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCSMTLEYRRECGRDSVLHSLTAISSADVGNLALSGGLECKHFLRLEDGAEIVRGRTEWRPKHPNNLGAKNQIPEEST 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0725 461 MobiDBLite consensus disorder prediction 440 461 - -
Lele20g0725 461 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 345 442 IPR029069 -
Lele20g0725 461 Pfam Acyl-ATP thioesterase 49 168 IPR021113 GO:0016790
Lele20g0725 461 FunFam Acyl-[acyl-carrier-protein] hydrolase 173 448 - -
Lele20g0725 461 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 100 447 IPR045023 GO:0006633|GO:0016297
Lele20g0725 461 Gene3D Hotdog Thioesterase 172 449 - -
Lele20g0725 461 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 176 327 IPR029069 -
Lele20g0725 461 Pfam Acyl-ACP thioesterase 179 443 IPR002864 GO:0006633|GO:0016790
Lele20g0725 461 MobiDBLite consensus disorder prediction 62 91 - -
Lele20g0725 461 CDD 4HBT 182 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0725 Lele-ChrLele20 14283101 14288369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0725 49 447 Acyl Lipid Metabolism Gene Families AT1G08510 76.049 0.0 611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0832 17 19712406 19716578 Lele20g0725 20 14283101 14288369 hybridization
Lele18g0693 18 4211385 4216416 Lele20g0725 20 14283101 14288369 hybridization