Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0832 ATGGAAGAGCAAGGTAAAAAGGAGACTGGTACGAGGGAAGAAAAGAAAACTGAAAACTCGGAACTTGGAAGGCTGGGTGGATACTATAAAACGAAGTCTCCGGACAACAATGTCTCTCACTCCTACAATTCAATAGCTGGCCCTAGCTCAAACGGCTGTGGTGCTCTGTCTCTGCTTGGGTCGAGTAGAGACCTCAGGCCCCGAATTTCCTCGCCTGATCCGGGTGTTGGAGCCTCTGCTCTCGTGCCTTGCTTGCTTGGTTGCCTGCGAATTGAAGGTTTAGAACTCATTATGGTGGCCACTGCTGCTACATCATTTTTCCCTGTTACTTCACCCTCACCAGACTCTGGTGCGAAGAGTACCAAACTTGGTGGTAAGTTCAGAGGACTTATATCCAAATCTACAACTTCTGGTGGCTTGCAAGTTAAGGCAAATGCTCAAGCCCCACCAAAGATTAATGGAGTTACTACATCTTTGGAAAGTGTGAAACATGAAAACGATACCCCATCATCCGCCCCAAGGACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTAGCTGCCATCACAACAATTTTCTTGGCAGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAAGCGACCTGACATGCTTATGGATCCGTTTGATATAGGAAAAATTTTTCAGGATGGTCTTGTGTTTCGGGAGAACTTTTCTATTAGGTCCTATGAAATAGGTGCTGATCGAACAGCATCTATTGAGACGTTAATGAACCATTTGCAGGAAACTGCCCTTAATCACGTTAAGAGTTCTGGGCTTCTTGGCGATGGCTTTGGTTCTACGCAAGAGATGTGTAAAAAGAACTTGATATGGGTGGTTACACGGATGCAGGTTGTGGTTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCTTCGGGGAAGAATGGCATGCGTCGTGATTGGGTTGTGCGGGACTGCAAAACTGGTGAAACATTGACAAGAGCTTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAGGCTGTCTAAAATACCAGAAGAAGTTAGAGGAGAGATAGGGCCCTACTTTGTGAACTCTGATCCTGTTGTGGAAGAGGATAACAGAAAACTGCCTAAACTTGATGACAACACAGCAGACCATAAGCGTACAGGCTTGAGTCCGCGGTGGAATGACTTAGATATCAATCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCTCAGTCGATTTTAGAGAGCCACGAGCTCTGCTCCATGACTCTGGAGTACCGGAGGGAGTGTGGTAGGGACAGTGTACTGCAGTCACTGACAGCTGTCTCTAGCGCTGATGTCGGGAATTTAGCTCAAAGCGGAGGTTTAGAGTGCAAGCATTTGCTTAGGCTTGAAGATGGTGCTGAGATTGTCAGAGGCAGGACAGAGTGGAGGCCAAAACACCCCAACAACTTGGGTGTCAACAATCAGATTCCAGCAGAAAGCACCTAG 1530 0.4673 MEEQGKKETGTREEKKTENSELGRLGGYYKTKSPDNNVSHSYNSIAGPSSNGCGALSLLGSSRDLRPRISSPDPGVGASALVPCLLGCLRIEGLELIMVATAATSFFPVTSPSPDSGAKSTKLGGKFRGLISKSTTSGGLQVKANAQAPPKINGVTTSLESVKHENDTPSSAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLMDPFDIGKIFQDGLVFRENFSIRSYEIGADRTASIETLMNHLQETALNHVKSSGLLGDGFGSTQEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWVVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIGPYFVNSDPVVEEDNRKLPKLDDNTADHKRTGLSPRWNDLDINQHVNNVKYIGWILESAPQSILESHELCSMTLEYRRECGRDSVLQSLTAVSSADVGNLAQSGGLECKHLLRLEDGAEIVRGRTEWRPKHPNNLGVNNQIPAEST 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0832 509 Gene3D Hotdog Thioesterase 221 497 - -
Lele17g0832 509 Pfam Acyl-ACP thioesterase 227 491 IPR002864 GO:0006633|GO:0016790
Lele17g0832 509 MobiDBLite consensus disorder prediction 1 34 - -
Lele17g0832 509 MobiDBLite consensus disorder prediction 1 21 - -
Lele17g0832 509 CDD 4HBT 230 346 - -
Lele17g0832 509 FunFam Acyl-[acyl-carrier-protein] hydrolase 221 496 - -
Lele17g0832 509 Pfam Acyl-ATP thioesterase 98 216 IPR021113 GO:0016790
Lele17g0832 509 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 148 495 IPR045023 GO:0006633|GO:0016297
Lele17g0832 509 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 224 375 IPR029069 -
Lele17g0832 509 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 394 490 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0832 Lele-ChrLele17 19712406 19716578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0832 98 495 Acyl Lipid Metabolism Gene Families AT1G08510 75.000 0.0 615
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0832 17 19712406 19716578 Lele19g0735 19 4292927 4297199 hybridization
Lele17g0832 17 19712406 19716578 Lele20g0725 20 14283101 14288369 hybridization