Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0693 ATGGCAGGGAGAGAGTGCTCTCTGTCTCTGCTTGGGTCGAGTAGGGACCTCGGGCCCCGAATTTCCTCGTCTGATCAGAGTGTTGGAGCCTCTGCTCTCGTGCCTTGCTTGTTTGGTTGCCTGCGAATTGAAGCTTTAGAACTCAATATGGTGGCCTCTGCTGCTACATCTTCATTTTTCCCTGTTACTTCACCCTCACCAGACTCTGGTGCGAAGAGTACCAAACTTGGTGGTGGGCTCAGAGGACTTAAATCCAAATCTACAACTTCTGGTGGCTTGCAAGTTAAGGCAAATGCTCAAGCCCCACCAAAGATTAATGGAGTTACTACATCTTTGGAAAGTGTGAAACATGAAAACGATACCCCATCATCCTCCCCAAGGACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTAGCAGCCATCACAACAATTTTCTTGGCAGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAAGCGACCTGACATGCTTATGGATCCGTTTGGTATAGGAAAAATTGTTCAGGATGGTCTTGTGTTTCGGGAGAACTTTTCTATTAGGTCCTATGAAATAGGTGCTGATCGAACTGCATCTATTGAGACGTTAATGAACCATTTGCAGGAAACTGCCCTTAATCATGTTAAGAGTTCTGGGCTTCTTGGCGACGGCTTTGGTTCTACACAAGAGATGTGTAAAAAGAACTTGATATGGGTGGTTGCTCGGATGCAGGTTGTGGTTGATCGTTATCCTACATGGGGCGATGTTGTTCAAGTACACACTTGGGTTTCTGCTTCGGGGAAGAATGGCATGCGTCGTGATTGGGTTGTGCGGGACTGCAAAACTGGTGAAACATTGACGAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAGGCTATCTAAAATACCAGAAGAAGTTAGAGGAGAGATAGGGCCCTACTTTGTGAACTCTGATCCTGTTGTAGAAGAGGATAACAGGAAACTGCCCAAACTTGATGACAACACAGCAGACTATAAGCGGACAGGCTTGAGCCCGCGGTGGAGTGACTTAGATGTCAACCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCACAGTCAATTCTGGAGAGCCACGAGCTCTGCTCCATGACTCTGGAGTACCGGAGGGAGTGTGGCAGGGACAGTGTACTGCAGTCACTTACAGCTGTATCTAGCGCCGATGTCGGTAATTTAGCTCTAAGCGGAGGTTTAGAGTGCAAGCATTTGCTTAGGCTTGAAGATGGTGCTGAGATTGTGAGAGGCAGGACAGAGTGGAGGCCAAAACACCCCAACAACTTGGGTGCCAACAATCAGATTCCAGCAGAAAGCACCTAG 1389 0.4766 MAGRECSLSLLGSSRDLGPRISSSDQSVGASALVPCLFGCLRIEALELNMVASAATSSFFPVTSPSPDSGAKSTKLGGGLRGLKSKSTTSGGLQVKANAQAPPKINGVTTSLESVKHENDTPSSSPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLMDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETLMNHLQETALNHVKSSGLLGDGFGSTQEMCKKNLIWVVARMQVVVDRYPTWGDVVQVHTWVSASGKNGMRRDWVVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIGPYFVNSDPVVEEDNRKLPKLDDNTADYKRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQSILESHELCSMTLEYRRECGRDSVLQSLTAVSSADVGNLALSGGLECKHLLRLEDGAEIVRGRTEWRPKHPNNLGANNQIPAEST 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0693 462 Gene3D Hotdog Thioesterase 173 450 - -
Lele18g0693 462 MobiDBLite consensus disorder prediction 62 92 - -
Lele18g0693 462 Pfam Acyl-ACP thioesterase 180 444 IPR002864 GO:0006633|GO:0016790
Lele18g0693 462 MobiDBLite consensus disorder prediction 448 462 - -
Lele18g0693 462 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 345 443 IPR029069 -
Lele18g0693 462 CDD 4HBT 183 299 - -
Lele18g0693 462 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 177 328 IPR029069 -
Lele18g0693 462 Pfam Acyl-ATP thioesterase 50 169 IPR021113 GO:0016790
Lele18g0693 462 FunFam Acyl-[acyl-carrier-protein] hydrolase 174 449 - -
Lele18g0693 462 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 101 448 IPR045023 GO:0006633|GO:0016297
Lele18g0693 462 MobiDBLite consensus disorder prediction 443 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0693 Lele-ChrLele18 4211385 4216416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0693 50 448 Acyl Lipid Metabolism Gene Families AT1G08510 77.284 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0693 18 4211385 4216416 Lele19g0735 19 4292927 4297199 hybridization
Lele18g0693 18 4211385 4216416 Lele20g0725 20 14283101 14288369 hybridization