Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0616 ATGCCATCCCAGATTTCGAGTCTAGCTCCAGCTTTGACTCTCTTCCCAACCCTGACACCCCCTCACAAAACCCTACTTTTCAACCAAATCTTAGTTCTTGTTATCACATTCCTTGCTTATGCTTCCTTCCATGCCTCCCGAAAGCCTCCAAGCATTGTGAAGAGTGTTCTTGGACCCGCTATTAATTCCAATTCGACTCAAGGTTCTAGCATCAATCCCAGCGATACAGGTTGGCCCCCGTTTAATGGAGCCAGGGGAACTCACCGGCTTGGCGAGCTGGATCTCTCTTTTCTATCTTCCTACGCCGTTGGCATGTATGTGGCAGGTCAGGTTGGTGATCGGATAGATTTGAGGTTGTTCCTTGTATTTGGGATGATGGGTAGTGGCATTTTCACCATACTTTTTGGCTTAGGCTATTGGTTTGATGTTCATGTATTGGGGTTTTTTGTTGGAGTTCAAATTGTTTGTGGATTATTTCAGTCAACAGGGTGGCCTTGTGTGGTTACAGTTGTGGGAAATTGGTTTGGAAAATCAAAGAAGGGCCTGATAATGGGGCTATGGAGTTCGCATACCTCGGTAGGGAATATCATTGGTTCGATTGTTGCCTCTGGAGTGTTAGAATTCGGATGGAGTTGGTCCTTTGTGGTTCCTGGACTTCTTATCATTTGTGTTGGGATTCTGGTGTATTTTTTTCTTGTTGTGAGTCCAGAGGATATGGGATTTGAGCACTCTGTAAGTGAGATTGAAATGAATGTAGAAACAGATGGAGTAGAGAATGTGCTAAACATGGAAACAGAGGAAGCAAAACTCCTTGATCCTGATGATTCGGATTCTTCATCTGCAATTGGGTTTTTTGAGGCATGGATGTTGCCTGGGGTGGCTGCATTTTCTTCTTGTCTTTTTTTCTCCAAGCTGGTTGCTTACACTTTTCTCTATTGGTTGCCCTTCTACATTAGGCACACAGCTGTTGCGGGTGTGCTTTTATCTAAAAAATCTGCTGGAATACTTTCGACAATATTCGACATTGGAGGAGTTCTTGGTGGAGTTATGGCTGGTTTCATTTCTGACGCGATTGAAGCTCGGGCTGTTACTTCTATCATATTCTTGTTCCTATCAATTCCAATGCTGGTTCTCTACCGGGTTTATGGGAGCCCCTCGATGGTGATCAACATTGCGTTGATGTTTCTCTTGGGCTTTTTGGTGAATGGTCCGTATGCACCAATCACAACAGCTGTGGCTGCTGATATTGATGGTACCGGTTCTGTTGGAGCTGCTCTCGGGCCACTGTTGACCAGGTATATTTCTACTCGTGGATGGAACAGTGTCTTCTTCATGCTAATTCTGTCTATTTTCCTTGCTGGCTTGTTCCTGGTTCGTGTGGCAGGAACTGAGATCAGACATAAGATGAATTCAGGAAATTGA 1422 0.4459 MPSQISSLAPALTLFPTLTPPHKTLLFNQILVLVITFLAYASFHASRKPPSIVKSVLGPAINSNSTQGSSINPSDTGWPPFNGARGTHRLGELDLSFLSSYAVGMYVAGQVGDRIDLRLFLVFGMMGSGIFTILFGLGYWFDVHVLGFFVGVQIVCGLFQSTGWPCVVTVVGNWFGKSKKGLIMGLWSSHTSVGNIIGSIVASGVLEFGWSWSFVVPGLLIICVGILVYFFLVVSPEDMGFEHSVSEIEMNVETDGVENVLNMETEEAKLLDPDDSDSSSAIGFFEAWMLPGVAAFSSCLFFSKLVAYTFLYWLPFYIRHTAVAGVLLSKKSAGILSTIFDIGGVLGGVMAGFISDAIEARAVTSIIFLFLSIPMLVLYRVYGSPSMVINIALMFLLGFLVNGPYAPITTAVAADIDGTGSVGAALGPLLTRYISTRGWNSVFFMLILSIFLAGLFLVRVAGTEIRHKMNSGN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0616 473 Gene3D MFS general substrate transporter like domains 27 245 IPR036259 -
Lele20g0616 473 SUPERFAMILY MFS general substrate transporter 22 466 IPR036259 -
Lele20g0616 473 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 466 IPR020846 GO:0022857
Lele20g0616 473 PIRSF Hexose_phosphate_transp 20 473 IPR000849 GO:0016020|GO:0022857|GO:0055085
Lele20g0616 473 Pfam Major Facilitator Superfamily 70 415 IPR011701 GO:0022857|GO:0055085
Lele20g0616 473 Gene3D MFS general substrate transporter like domains 289 471 IPR036259 -
Lele20g0616 473 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 27 469 - -
Lele20g0616 473 FunFam Sugar phosphate exchanger 3 isoform 1 23 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0616 Lele-ChrLele20 13457457 13459182 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele20g0616 1 473 Organic Solute Cotransporters AT2G13100 67.273 0.0 633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0716 17 18892104 18894497 Lele20g0616 20 13457457 13459182 hybridization
Lele18g0806 18 5073344 5075094 Lele20g0616 20 13457457 13459182 hybridization