Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0716 ATGCATACCCGCTCGCGGGTGCGGTCGACGACAAGTCACTTCCCCAGTTTCGGAATCCGTCGTTGCAACCAAAAGGTTTTGACCTTTCGCCTGAAAATTCCTTTTTTCAACTCCTTCCTTTCACAGTTCCATGTTGATTGGTATGCAATTCCTGTCCCGATCTTAGAACTATCCATAGCATCTAGGAGATCGTTGATTTCGAGTCTAGCTCCAGCTTTGACTCTCTTCCCAAGCCTGAAACCCCCTCACAAAACCCTACTTTTTCACCAAATCTTAGTTCTTGTTATCACATTCCTTGCTTATGCTTCCTTCCATGCCTCCCGAAAGCCTCCCAGCATTGTGAAGAGTGTTCTTGGACCCACTATTAATTCCAATTCGACTCAAGGTTCTCGCACCAGCCCCGGCGATACAGGTTGGCCCCCGTTTAATGGAGTCAGGGGGACTCACCGGCTTGGCGAGCTGGATCTCGCTTTTCTATCTTCCTACGCCGTTGGCATGTACGTGGCAGGTCATGTTGGTGATCGGATTGATTTGAGGTTGTTCCTTGTATTTGGGATGATGGGTAGTGGCATTTTTACCATACTTTTTGGCTTAGGCTATTGGTTTGATGTTCATGTATTGGGTTTTTTTGTTGGAGTTCAAATTGTTTGTGGATTATTTCAGTCAATAGGGTGGCCTTGTGTGGTTGCAGTTGTGGGAAATTGGTTTGGAAAATCAAAGAGGGGCTTGATAATGGGTATTTGGAGTTCACATACCTCGGTGGGGAATATCATCGGTTCGATTGTTGCCTCTGGCGTGTTAGAATTCGGATGGGGTTGGTCCTTTGTGGTGCCTGGACTTCTTATCATTTGTGTGGGGATTCTGGTGTATTTGTTTCTTGTTGTGAGTCCAGAGGATATGGGACTTGAGCACTCTGTAAGTGAGATCGAAATGAATGGAGAAACAGATGGAGTAGAGAATGTGCAAAAAATGGAAACAGAGGAAGCAAAACTCCTTGATTCTGATGGTTTGGATTCTTCGTCCGCAATTGGGTTTTTTGAGGCATGGATGTTACCTGGGGTGGCTGCATTTTCCTGTTGTCTTTTTTTCTCCAAGCTGGTTGCTTACACTTTTCTCTATTGGTTGCCCTTCTACATTAGGCACACAGCTGTTGCTGGTGTGCATTTATCTAAAAAATCTGCTGGAATACTTTCAACAATATTCGACATTGGAGGAGTTCTTGGTGGAGTTATGGCTGGTTTCATTTCTGACATAGTTGAAGCTCGGGCTGTTACTTCTATCATATTCTTGTTCCTATCAATTCCAATGCTGGTCCTCTACCGGGTTTACGGGAGCCTCTCAATGTTGATCAACATCGCGTTGATGTTCCTTTCGGGCTTTTTGGTGAATGGTCCGTACGCACTAATCACAACAGCCGTGGCTGCTGATCTTGGTACGCAGACATTGAATCAAGGGAATTCACGAGCACTGGCAACTGTGACTGCGATCATAGATGGTACCGGTTCTGTTGGGGCAGCTTTCGGGCCACTCTTGGCCGGGTATATTTCTACTAGGGGATGGAACAGCGTCTTCTTTATGCTAATTCTGTCTATTTTCCTTGCTGGCTTGTTCCTAGTTCGTGTGGCAAGAACTGAAATCAGAGATAAGATGAATGCAGGAAAGTGA 1665 0.4553 MHTRSRVRSTTSHFPSFGIRRCNQKVLTFRLKIPFFNSFLSQFHVDWYAIPVPILELSIASRRSLISSLAPALTLFPSLKPPHKTLLFHQILVLVITFLAYASFHASRKPPSIVKSVLGPTINSNSTQGSRTSPGDTGWPPFNGVRGTHRLGELDLAFLSSYAVGMYVAGHVGDRIDLRLFLVFGMMGSGIFTILFGLGYWFDVHVLGFFVGVQIVCGLFQSIGWPCVVAVVGNWFGKSKRGLIMGIWSSHTSVGNIIGSIVASGVLEFGWGWSFVVPGLLIICVGILVYLFLVVSPEDMGLEHSVSEIEMNGETDGVENVQKMETEEAKLLDSDGLDSSSAIGFFEAWMLPGVAAFSCCLFFSKLVAYTFLYWLPFYIRHTAVAGVHLSKKSAGILSTIFDIGGVLGGVMAGFISDIVEARAVTSIIFLFLSIPMLVLYRVYGSLSMLINIALMFLSGFLVNGPYALITTAVAADLGTQTLNQGNSRALATVTAIIDGTGSVGAAFGPLLAGYISTRGWNSVFFMLILSIFLAGLFLVRVARTEIRDKMNAGK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0716 554 Gene3D MFS general substrate transporter like domains 85 306 IPR036259 -
Lele17g0716 554 Pfam Major Facilitator Superfamily 132 476 IPR011701 GO:0022857|GO:0055085
Lele17g0716 554 Gene3D MFS general substrate transporter like domains 350 552 IPR036259 -
Lele17g0716 554 SUPERFAMILY MFS general substrate transporter 83 547 IPR036259 -
Lele17g0716 554 ProSiteProfiles Major facilitator superfamily (MFS) profile. 95 547 IPR020846 GO:0022857
Lele17g0716 554 FunFam Sugar phosphate exchanger 3 isoform 1 84 308 - -
Lele17g0716 554 PIRSF Hexose_phosphate_transp 80 554 IPR000849 GO:0016020|GO:0022857|GO:0055085
Lele17g0716 554 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 83 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0716 Lele-ChrLele17 18892104 18894497 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g0716 63 554 Organic Solute Cotransporters AT2G13100 71.717 0.0 690
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0716 17 18892104 18894497 Lele19g0841 19 5096642 5099000 hybridization
Lele17g0716 17 18892104 18894497 Lele20g0616 20 13457457 13459182 hybridization