Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0806 ATGCCATCCCAGATTTCGAGTCTAGCTCCAGCTTTGACTCTCTTCCCAACCCTGAAACCCCCTCACAAAACCCTACTTTTTCACCAAATCTCAGTTCTTGTTATCACATTCCTTGCTTATGCTTCCTTCCATGCCTCCCGAAAGCCTCCCAGCATTGTGAAGAGTGTTCTTGGACCCACTATTAATTCCAATTCGACTCAAGGTTCTAGCATCAATCCCGGCGATACAGGTTGGCCCCCATTTAATGGAGCCAGGGGAACTCACCGGCTTGGCGAGCTGGATCTCGCTTTTCTATCTTCCTACGCCGTTGGCATGTATGTGGCAGGTCATGTTGGTGATCGGATAGATTTGAGGTTGTTCCTTGTATTTGGGATGATGGGTAGTGGCATTTTCACCATACTTTTTGGCTTAGGCTATTGGTTTGATGTTCATGTATTGGGGTTTTTTGTTGGAGTTCAAATTGTTTGTGGATTATTTCAGTCAATAGGGTGGCCTTGTGTGGTTGCAGTTGTGGGAAATTGGTTTGGAAAATCAAAGAGGGGCTTGATAATGGGGATATGGAGTTCGCATACCTCGGTAGGGAATATCATTGGTTCGATTGTTGCCTCTGGAGTGTTAGAATTCGGATGGGGTTGGTCCTTTGTGGTTCCTGGACTTCTTATCATTTGTGTTGGGATTCTGGTGTATTTGTTTCTTGTTGTGAGTCCAGAGGATATGGGATTTGAGCACTCAGTAAGTGAGATTGAAATGAATGTAGGAACAGATGGAGTAGAGAATGTGCATAAAATGGAAACAGAGGAAACAAAACTCCTTGATTCTGATGATTCTGATTCTTCATCTGCAATTGGGTTTTTTGAGGCATGGATGTTACCTGGGGTGGCTGCATTTTCTTCTTGTCTTTTTTTCTCCAAGCTGGTTGCTTACACTTTTCTCTATTGGTTGCCCTTCTACATTAGGCACACAGCTGTTGCGGGCGTACTTTTATCGAAAAAATCTGCTGGAATACTTTCGACAATATTCGACATTGGAGGAGTTCTTGGCGGAGTTATGGCTGGTTTCATTTCTGACGTGATTGAAGCTCGGGCTGTTACTTCTATCATATTCTTGTTCCTATCAATTCCAATGCTGGTTCTCTACCGGGTTTATGGGAGCCTCTCGATGTTGATCAACATTGCGTTGATGTTTCTCTCGGGCTTTTTGGTGAATGGTCCTTATGCACTAATCACAACAGCTGTGGCTGCTGATCTTGGTACGCAGACCTTGAATCAAGGGAATTCACGAGCACTGGCAACCGTGATTGCAATCATAGATGGTACCGGTTCTGTTGGAGCTGCTCTCGGGCCACTGTTGGCCGGGTATATTTCTACTAGGGGATGGAACAGTGTCTTCTTCATGCTAATTCTATCTATTTTCCTTGCTGGCTTGTTCCTGGTTCGTGTGGCAAGAACTGAGATCAGAGATAAGATGAATGCAGGAAAGTGA 1482 0.446 MPSQISSLAPALTLFPTLKPPHKTLLFHQISVLVITFLAYASFHASRKPPSIVKSVLGPTINSNSTQGSSINPGDTGWPPFNGARGTHRLGELDLAFLSSYAVGMYVAGHVGDRIDLRLFLVFGMMGSGIFTILFGLGYWFDVHVLGFFVGVQIVCGLFQSIGWPCVVAVVGNWFGKSKRGLIMGIWSSHTSVGNIIGSIVASGVLEFGWGWSFVVPGLLIICVGILVYLFLVVSPEDMGFEHSVSEIEMNVGTDGVENVHKMETEETKLLDSDDSDSSSAIGFFEAWMLPGVAAFSSCLFFSKLVAYTFLYWLPFYIRHTAVAGVLLSKKSAGILSTIFDIGGVLGGVMAGFISDVIEARAVTSIIFLFLSIPMLVLYRVYGSLSMLINIALMFLSGFLVNGPYALITTAVAADLGTQTLNQGNSRALATVIAIIDGTGSVGAALGPLLAGYISTRGWNSVFFMLILSIFLAGLFLVRVARTEIRDKMNAGK 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0806 493 FunFam Sugar phosphate exchanger 3 isoform 1 23 247 - -
Lele18g0806 493 Gene3D MFS general substrate transporter like domains 24 245 IPR036259 -
Lele18g0806 493 PANTHER MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B 24 489 - -
Lele18g0806 493 Gene3D MFS general substrate transporter like domains 289 491 IPR036259 -
Lele18g0806 493 PIRSF Hexose_phosphate_transp 18 493 IPR000849 GO:0016020|GO:0022857|GO:0055085
Lele18g0806 493 ProSiteProfiles Major facilitator superfamily (MFS) profile. 34 486 IPR020846 GO:0022857
Lele18g0806 493 Pfam Major Facilitator Superfamily 71 415 IPR011701 GO:0022857|GO:0055085
Lele18g0806 493 SUPERFAMILY MFS general substrate transporter 23 486 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0806 Lele-ChrLele18 5073344 5075094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0806 1 493 Organic Solute Cotransporters AT2G13100 72.177 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0806 18 5073344 5075094 Lele19g0841 19 5096642 5099000 hybridization
Lele18g0806 18 5073344 5075094 Lele20g0616 20 13457457 13459182 hybridization