Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0983 ATGGGGGTCGAGGAACAGAAATCACACATGGAGGCGGGAAACTTGTCCAACGATATATTGTTCTTCTTAACTGTATATAGTGGAATTGAAATATGGCGCATTGAGAATTTAAAGCCAGTTTCTGTTCCTACCTCCTCCTATGGGAAGTTTTACACTGGCGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGTGGTGCACTGCGTCATGATATCCATTATTGGCTGGGAAAATTGAAGCAGGATGAAGCTGGTGTTGCAGCCATCAAAACCATTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAATCACAGGGTCATGAAACTGAGAAGTTTTTGTCTTATTTCAAACCATGTATAATTCCTCTAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGTTCCTTTTGCAAGGTCAACACTCACCCATGATGACGTTTTTATTCTGGATACCCAGTCTAAAATCTTTCAATTTAATGGTTCTAATTCATCTATTCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAATTACCATGATGGGAGATGTGAGGTTGCCTCTGTTGAGGATGGAAAGTTGATGGCTGATGCCGATGCTGGAGAATTTTGGGCCGTCTTCGGGGGCTTTGCTCCTCTTCCACGAAAAACAGCCAGTGATGATGATAATACTGATGATTCTCAGCCTCCAAAGCTGCTGTGTGTAGTGAAGGGGGAGGCAGAACCTAGTGAGAGTGATTCTTTGACAAGAGAACTACTAGACACAAATAAATGTTATATTCTTGATTGTGGTTTGGAAGTTTTTGTTTGGACGGGAAGAAACACCTCTCTCGATGAAAGAAAAAGTGCAAGCGCAGCTGCAGAAGAATTAATCAGTGGCTCTGATCGACTAAAATCCCACATAATTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTCGATTCTTGGCCACAAACACCTAATGTAACTGTATCAGAAGATGGTCGTGGCAGGGTGGCAGCACTTCTAAGGCGTCAAGGAGTGGATGTCAAGGGTCTGTTGAAAGTTGATCCAGTAAAAGAAGAACCTGAACCCCACATTGATTGCACAGGACGTTTCCAGGTTTGGCGGGTGAATGGCAAGGAAAAGATTCTCCTTGGAGATTCTGATCATTCAAAACTTTATAGTGGTGACTGCTATGTCTTTCTCTACTCATATCCAGGAGAAGATCGAGAAGAGCATCTTGTAATGACATGGATTGGAAAAAACAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCAATGGCAAGCAAAATTGTTGATACAATGAAGTTTATTCCTGCCCAGGCTCGAATTTATGAAGGGAATGAACCAATTCAGTTTTATTCTATCCTCCAAAGCTTTATTGTTTTTAAGGGTGGTCTTAGTGATGGATATAAGAATTATATTACCGAGAAGGAAATTCCAGATGACACTTACAAGGAAGATGGCGTAGCACTGTTCCGCATCCAGGGCTCTGGACCTGAAAGTATGCAAGCTATACAAGTCGAAACAGTTGCTTCCTCCTTGAATTCATCATATTGCTACATACTTCATGATGGGCCCACAGTCTTCACTTGGCTGGGAAGTCTTACAAATTCAGATGACCATGAACTAGTCGAGAGGATGCTGGATTTGATAAAGCCGGAATTACAAACCAAACCACAAAAGGAAGGTTCAGAGTCTGAACAGTTTTGGGATTTGCTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTGCAAGGGATGCTGAAGGTGATCCTCGCTTATTTTCTTGCAGCTACTCAAAAGAAAGTTTGAAGGTGAGTTTACATTCTGATGGATATTTTTCTTTTCCTGTTTTGCTCATTTGGCTGTTAATTTGGAATAGTTCTGGGTTATGGAGATCCTGGGGTGAGAGGGGGATTGTTAACAAAGTGACAGAAGTATACAACTTTTCCCAGGATGATTTAATGACTGAAGATATTATGATCATAAATTGTCACTCAGAAATCTTTGTCTGGATTGGCCAGCAGATTGACCTCAAGAGTAGAACAAAAGCTCTAACAATTGGTGAGATGCTGGGAAACTCATTTCAAAGGAGGCTTACAATAATAAAAAATGGGGGCACTGCACCTTTGGATAGACCAAAACGGAGAAAAACAGTGTCTTATGGAGGAAGGTCGGGTAGTGCACCGGAAAAAGCCCAGCGATCTCGCAGTGTGTGCGCTACTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCATTAGCAGCTGCATTTGAAGGTCCCAAGGACAGAAACCTTTCAACTCCACCTCCTATGGTTAGAAAGCTGTATGCAAAATCTCTGACACCAGACTCAGCAACATTGGCACCCAAATCTGCAGTTATAGCTGCACTTAGTTCTAGTTTTGAATCATTCCGTCCATCAAAAGATAATTTTATACCTCGATCATTCAAAGTGAACAAAGAGGCCTCAAAGCCAGAGACAAGCAATAGGAAAGATTCTATGAGCAGTATACAAGAAGATGTGAAAGAGGGTGAAGCTGAAGATGATGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGAAGATCCTGTAGCAGACATTGATGTGACCAGGAGAGAGGCTTATATGTCAGTTGAGGAGTTCAAAGAGAAGTTCGGAATGACAAAAAAGGATTTCAACAAGTTGCCCAAATGGAAACAGAACAAACTCAAGATGACCATTCAGTTATTTTGA 2802 0.4168 MGVEEQKSHMEAGNLSNDILFFLTVYSGIEIWRIENLKPVSVPTSSYGKFYTGDSYVILKTTASKSGALRHDIHYWLGKLKQDEAGVAAIKTIELDAALGGRAVQYRESQGHETEKFLSYFKPCIIPLEGGVASGFKHVPFARSTLTHDDVFILDTQSKIFQFNGSNSSIQERAKALEVLQYIKDNYHDGRCEVASVEDGKLMADADAGEFWAVFGGFAPLPRKTASDDDNTDDSQPPKLLCVVKGEAEPSESDSLTRELLDTNKCYILDCGLEVFVWTGRNTSLDERKSASAAAEELISGSDRLKSHIIRVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLRRQGVDVKGLLKVDPVKEEPEPHIDCTGRFQVWRVNGKEKILLGDSDHSKLYSGDCYVFLYSYPGEDREEHLVMTWIGKNSVEEERASAISMASKIVDTMKFIPAQARIYEGNEPIQFYSILQSFIVFKGGLSDGYKNYITEKEIPDDTYKEDGVALFRIQGSGPESMQAIQVETVASSLNSSYCYILHDGPTVFTWLGSLTNSDDHELVERMLDLIKPELQTKPQKEGSESEQFWDLLGGKSEYPSQKIARDAEGDPRLFSCSYSKESLKVSLHSDGYFSFPVLLIWLLIWNSSGLWRSWGERGIVNKVTEVYNFSQDDLMTEDIMIINCHSEIFVWIGQQIDLKSRTKALTIGEMLGNSFQRRLTIIKNGGTAPLDRPKRRKTVSYGGRSGSAPEKAQRSRSVCATPDRVRVRGRSPAFNALAAAFEGPKDRNLSTPPPMVRKLYAKSLTPDSATLAPKSAVIAALSSSFESFRPSKDNFIPRSFKVNKEASKPETSNRKDSMSSIQEDVKEGEAEDDEGLPVYPYERLKIGSEDPVADIDVTRREAYMSVEEFKEKFGMTKKDFNKLPKWKQNKLKMTIQLF 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0983 933 CDD gelsolin_S5_like 501 592 - -
Lele19g0983 933 MobiDBLite consensus disorder prediction 838 860 - -
Lele19g0983 933 FunFam Villin-4 232 338 - -
Lele19g0983 933 Gene3D Severin 137 231 IPR029006 -
Lele19g0983 933 MobiDBLite consensus disorder prediction 835 872 - -
Lele19g0983 933 FunFam Gelsolin 504 596 - -
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 138 223 - -
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 495 599 - -
Lele19g0983 933 SMART VHP_1 898 933 IPR003128 GO:0003779|GO:0007010
Lele19g0983 933 PANTHER VILLIN 28 923 IPR007122 GO:0051015
Lele19g0983 933 ProSiteProfiles Headpiece (HP) domain profile. 868 933 IPR003128 GO:0003779|GO:0007010
Lele19g0983 933 Gene3D Severin 366 501 IPR029006 -
Lele19g0983 933 MobiDBLite consensus disorder prediction 727 751 - -
Lele19g0983 933 Gene3D Severin 598 735 IPR029006 -
Lele19g0983 933 CDD gelsolin_S4_like 372 469 - -
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 576 715 - -
Lele19g0983 933 SUPERFAMILY VHP, Villin headpiece domain 859 933 IPR036886 GO:0003779|GO:0007010
Lele19g0983 933 Gene3D Severin 232 339 IPR029006 -
Lele19g0983 933 FunFam Gelsolin 19 138 - -
Lele19g0983 933 Gene3D Severin 502 597 IPR029006 -
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 369 512 - -
Lele19g0983 933 FunFam Villin-4 369 503 - -
Lele19g0983 933 Pfam Villin headpiece domain 898 933 IPR003128 GO:0003779|GO:0007010
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 20 139 - -
Lele19g0983 933 Gene3D Severin 24 136 IPR029006 -
Lele19g0983 933 CDD gelsolin_S3_like 233 327 - -
Lele19g0983 933 Pfam Gelsolin repeat 38 118 IPR007123 -
Lele19g0983 933 Pfam Gelsolin repeat 137 201 IPR007123 -
Lele19g0983 933 Pfam Gelsolin repeat 252 321 IPR007123 -
Lele19g0983 933 Pfam Gelsolin repeat 658 698 IPR007123 -
Lele19g0983 933 SMART VILL_6 125 218 IPR007122 GO:0051015
Lele19g0983 933 SMART VILL_6 643 720 IPR007122 GO:0051015
Lele19g0983 933 SMART VILL_6 238 328 IPR007122 GO:0051015
Lele19g0983 933 SMART VILL_6 27 124 IPR007122 GO:0051015
Lele19g0983 933 SMART VILL_6 503 590 IPR007122 GO:0051015
Lele19g0983 933 SMART VILL_6 376 473 IPR007122 GO:0051015
Lele19g0983 933 SUPERFAMILY Actin depolymerizing proteins 209 336 - -
Lele19g0983 933 CDD gelsolin_S1_like 28 131 - -
Lele19g0983 933 Gene3D Villin headpiece domain 871 933 IPR036886 GO:0003779|GO:0007010
Lele19g0983 933 PRINTS Gelsolin family signature 420 438 IPR007122 GO:0051015
Lele19g0983 933 PRINTS Gelsolin family signature 453 473 IPR007122 GO:0051015
Lele19g0983 933 PRINTS Gelsolin family signature 307 328 IPR007122 GO:0051015
Lele19g0983 933 PRINTS Gelsolin family signature 576 595 IPR007122 GO:0051015
Lele19g0983 933 PRINTS Gelsolin family signature 395 411 IPR007122 GO:0051015
Lele19g0983 933 PRINTS Gelsolin family signature 516 536 IPR007122 GO:0051015
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0983 Lele-ChrLele19 6182117 6191280 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0559 17 17723730 17731410 Lele19g0983 19 6182117 6191280 hybridization
Lele18g0954 18 6195079 6202833 Lele19g0983 19 6182117 6191280 hybridization