Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0954 ATGTTGCATGCGCATGTGCGTGCATGGTATTCTTTGCTATATTCCAGCTTGTTCTCCTTAACGTTATTTAGTGGACTTGAAATTTGGCGCGTTGAGAATTTAAAATCAGTTTCTGTTCCTACCTCCTCCTATGGGAAGTTTTACGCTGGGGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGTGGTGCACTGCGTCATGATATCCATTACTGGCTGGGTAAAGACACCAGTCAGGATGAAGCTGGCGTTGCAGCCATTAAAACCATTGAGCTGGATGCAGCTCTTGGAGGACGCGCTGTTCAGTATCGTGAATCACAGGGTCATGAAACTGAAAAGTTCTTGTCTTATTTCAAACCATGTATAATTCCTCTAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGTTCCTTTTGCAAGATCAACACTCACCCATGATGATGTTTTTATTCTGGATACTCAATCTAAAATCTTTCAATTTAATGGTTCTAATTCATCAATCCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAACTACCATGATGGGAAATGTGAGGTTGCCTCTGATGGAAGGTTGATGGCTGATGCTGATGCTGGAGAATTTTGGGCCGTCTTCGGGGGCTTTGCTCCTCTTCCTCGCAAAACAGCCAGTGATGATGATAATACTGATGATGATCAGCCTCCAAAGCTGCTATGTGGCCCTGATCGACAAAAATCCCACATTGTTTGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTTGATTCTTGGCCTCAAACACCTAATGTAACTGTATCAGAAGATGGTCGTGGCAGGGTGGCAGCACTTCTAAAGCGTCAAGGAGTGGATGTCAAGGGTCTGTTGAAAGTTGATCCTGTAAAAGAAGAACCTCAACCCCACATTGATTGCACAGGACGTTTGCAGGTTTGGCGAGTGAATGGCACTGAAAAGGTTCTCCTTCAAGATTCTGATCATTCAAAACTTTATAGTGGTGATTGCTATGTCTTTCTCTACTCATATCCAGGAGAAGATCGAGAAGAGCATCTTGTAATGATATGGATTGGAAAGAACAGTGTTGAGGAAGAAAGAGCTTCATCTATTTCAATTTCAAGCAAAATTGTTGAATCAATGAAGTATATTCCTGCCCAGGCTCGAATTTATGAAGGGAATGAACCAATTCAGTTTTATTCTATCCTCCAAAGCTTCATTGTTTTCAAGGGTGGTCTTAGTGATGGATATAAGAATTACATTACGGAGAAGGAAATTTCAGATGACACTTACAAGGAAGATGGTGTAGCACTGTTCCGAATCCAGGGCTCTGGACCTGAAAGTATGCAAGCCATACAAGTTGAAACAGTTGCTTCCTCCTTGAATTCCTCATATTGCTACATACTTCATGATGGGCCAACAGTGTTCACTTGGCTTGGAAGCCTTACAAACTCAGATGACCATGAACTAGTTGAGAGGATGCTAGATTTGATAAAGCTGATATTGGTTAATGTTTCAGATCTCAACTTTGAGTTTCTGAACATTTTGAACTTTCAGGAGCCAGAATTACAAACAAAACCACAAAAGGAAGGTTCAGAGTCTGAACAGTATTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTGCAAGGGATGCTGAAGGTGATCCTCGCCTATTTTCTTGCAACTTCTCAAAAGAAAATTTGAAGGTGACAGAAGTATACAACTTTTCCCAGGATGATTTAATGACTGAAGATATTATGATTTTGAATTGTCACTCAGAAATCTTTGTCTGGATTGGCCAGCAGATTGACCTCAAGAGTAGAACAAAAGCTCTAACAATTGGTGAGAAATTTCTTGAGCATGATTTTTGTATGGAAAATTTATCTCGTGAAGCTCCCATATATGTTGTCATGGAAGGGAGTGAACCACCTTTCTTCACTCGTTTCTTCAAATGGGAGTCTGCAAAATCTGCAATGCTGGGAAACTCATTTCAAAGAAGGCTTACAATAATAAAAAATGGAGGCACTCCACCTTTGGATAGACCAAAACGGAGAACAACAGCGTCTTATGGAGGAAGGTCCGGTGGTGCACCGGAAAAAGCCCAGCGATCTCGCAGTGTGTGCGCTACTCCTGATCGTGTCCGTGTGAGAGGCAGGTCTCCAGCCTTTAATGCATTAGCAGCTGCATTTGAAGGTCCCAAGGACAGAAACCTTTCAACTCCACCTCCTATGGTTAGAAAGCTGTATGCAAAATCTCTGACACCAGACTCGGCAACATTGGCACCCAAATCTGCAGTTATAGCTGCACTTAGTTCTAGTTTTGAATCATTCCGTCCATCAAAAGACAATTTCATCCCTCGATCATTCAAAGTGAACAAAGAGGCCTCAAAGCCAGAGACGACCAATGGGAAAGATTCTATGAGCAGCATACAAGAAGATGTGAAAGAGGGTGAAGCTGAAGATGATGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGAAGATCCTGTAGCAGACATTGATGTGACCAGGAGAGAGGCTTATATGTCAGCTGAGGAGTTCAAAGAGAAGTTTGGGATGACAAAAAAGGATTTCTACAAGTTGCCCAAATGGAAACAGAACAAACTCAAGATGACCATTCAATTATTTTGA 2691 0.4143 MLHAHVRAWYSLLYSSLFSLTLFSGLEIWRVENLKSVSVPTSSYGKFYAGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHETEKFLSYFKPCIIPLEGGVASGFKHVPFARSTLTHDDVFILDTQSKIFQFNGSNSSIQERAKALEVLQYIKDNYHDGKCEVASDGRLMADADAGEFWAVFGGFAPLPRKTASDDDNTDDDQPPKLLCGPDRQKSHIVCVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLKRQGVDVKGLLKVDPVKEEPQPHIDCTGRLQVWRVNGTEKVLLQDSDHSKLYSGDCYVFLYSYPGEDREEHLVMIWIGKNSVEEERASSISISSKIVESMKYIPAQARIYEGNEPIQFYSILQSFIVFKGGLSDGYKNYITEKEISDDTYKEDGVALFRIQGSGPESMQAIQVETVASSLNSSYCYILHDGPTVFTWLGSLTNSDDHELVERMLDLIKLILVNVSDLNFEFLNILNFQEPELQTKPQKEGSESEQYWDLLGGKSEYPSQKIARDAEGDPRLFSCNFSKENLKVTEVYNFSQDDLMTEDIMILNCHSEIFVWIGQQIDLKSRTKALTIGEKFLEHDFCMENLSREAPIYVVMEGSEPPFFTRFFKWESAKSAMLGNSFQRRLTIIKNGGTPPLDRPKRRTTASYGGRSGGAPEKAQRSRSVCATPDRVRVRGRSPAFNALAAAFEGPKDRNLSTPPPMVRKLYAKSLTPDSATLAPKSAVIAALSSSFESFRPSKDNFIPRSFKVNKEASKPETTNGKDSMSSIQEDVKEGEAEDDEGLPVYPYERLKIGSEDPVADIDVTRREAYMSAEEFKEKFGMTKKDFYKLPKWKQNKLKMTIQLF 896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0954 896 CDD gelsolin_S5_like 439 551 - -
Lele18g0954 896 Gene3D Severin 445 554 IPR029006 -
Lele18g0954 896 Gene3D Severin 555 675 IPR029006 -
Lele18g0954 896 Gene3D Severin 20 134 IPR029006 -
Lele18g0954 896 PANTHER VILLIN 241 886 IPR007122 GO:0051015
Lele18g0954 896 Gene3D Severin 135 232 IPR029006 -
Lele18g0954 896 MobiDBLite consensus disorder prediction 680 718 - -
Lele18g0954 896 CDD gelsolin_S6_like 564 661 - -
Lele18g0954 896 CDD gelsolin_S4_like 310 407 - -
Lele18g0954 896 Pfam Gelsolin repeat 580 655 IPR007123 -
Lele18g0954 896 Pfam Gelsolin repeat 135 191 IPR007123 -
Lele18g0954 896 Pfam Gelsolin repeat 36 116 IPR007123 -
Lele18g0954 896 SUPERFAMILY Actin depolymerizing proteins 304 450 - -
Lele18g0954 896 FunFam Villin-like 1 834 896 - -
Lele18g0954 896 SUPERFAMILY Actin depolymerizing proteins 433 557 - -
Lele18g0954 896 Gene3D Villin headpiece domain 834 896 IPR036886 GO:0003779|GO:0007010
Lele18g0954 896 SUPERFAMILY Actin depolymerizing proteins 24 137 - -
Lele18g0954 896 Pfam Villin headpiece domain 861 896 IPR003128 GO:0003779|GO:0007010
Lele18g0954 896 SUPERFAMILY Actin depolymerizing proteins 136 273 - -
Lele18g0954 896 FunFam Villin-like 1 556 677 - -
Lele18g0954 896 MobiDBLite consensus disorder prediction 798 838 - -
Lele18g0954 896 SUPERFAMILY Actin depolymerizing proteins 538 660 - -
Lele18g0954 896 SMART VHP_1 861 896 IPR003128 GO:0003779|GO:0007010
Lele18g0954 896 SMART VILL_6 565 662 IPR007122 GO:0051015
Lele18g0954 896 SMART VILL_6 441 549 IPR007122 GO:0051015
Lele18g0954 896 SMART VILL_6 123 214 IPR007122 GO:0051015
Lele18g0954 896 SMART VILL_6 24 122 IPR007122 GO:0051015
Lele18g0954 896 SMART VILL_6 314 411 IPR007122 GO:0051015
Lele18g0954 896 Gene3D Severin 302 444 IPR029006 -
Lele18g0954 896 ProSiteProfiles Headpiece (HP) domain profile. 831 896 IPR003128 GO:0003779|GO:0007010
Lele18g0954 896 CDD gelsolin_S1_like 25 129 - -
Lele18g0954 896 FunFam Gelsolin 18 136 - -
Lele18g0954 896 FunFam Villin-4 307 443 - -
Lele18g0954 896 PRINTS Gelsolin family signature 358 376 IPR007122 GO:0051015
Lele18g0954 896 PRINTS Gelsolin family signature 333 349 IPR007122 GO:0051015
Lele18g0954 896 PRINTS Gelsolin family signature 616 635 IPR007122 GO:0051015
Lele18g0954 896 PRINTS Gelsolin family signature 245 266 IPR007122 GO:0051015
Lele18g0954 896 PRINTS Gelsolin family signature 391 411 IPR007122 GO:0051015
Lele18g0954 896 PRINTS Gelsolin family signature 587 609 IPR007122 GO:0051015
Lele18g0954 896 SUPERFAMILY VHP, Villin headpiece domain 822 896 IPR036886 GO:0003779|GO:0007010
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0954 Lele-ChrLele18 6195079 6202833 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0954 18 6195079 6202833 Lele19g0983 19 6182117 6191280 hybridization
Lele18g0954 18 6195079 6202833 Lele20g0465 20 12330286 12337848 hybridization