Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0559 ATGATCGAAAAATTCGAAAATGTAACGACTAAGAAAGAGCATTACAGCATGTTGGTTTACGAGATCAGCTGCACAGTTGGTATTCTTTGGTATATTCTAGCTTGGTTATACAAGACCAAAAAAGTAGATTATTATTTCTTCTTAACTGTATATAGTGGAATTGAAATATGGCGCATTGAGAATTTAAAACCAGTTTCTGTTCCTACCTCCTCCTATGGGAAGTTTTACACTGGAGATTCCTACGTGATCTTGAAGACAACAGCTTCAAAAAGTGGTGCATTGCGTCATGATATCCATTACTGGCTGGGTAAAGACACCAGTCAGGATGAAGCTGGTGTTGCAGCCATCAAAACCATTGAGCTGGATGCAGCTCTTGGAGGACGTGCTGTTCAGTATCGTGAATCACAGGGTCATGAAACTGAGAAGTTTTTGTCTTATTTCAAACAATGTATAATTCCTCTAGAAGGTGGAGTTGCCTCTGGTTTTAAACATGTTCCTTTTGCAAGATCAACACTCACCCATGATGACGTTTTTATTCTGGATACCCAATCTAAAATCTTTCAATTTAATGGTTCTAATTCATCTATCCAAGAAAGGGCTAAAGCATTGGAAGTTCTACAGTATATAAAGGATAATTACCATGATGGGAAATGTGAGGTTGCCTCTGTGGAGGATGGAAAGTTGATGGCTGATGCCGATGCTGGAGAATTTTGGGCCGTCTTCGGGGGCTTTGCTCCTCTTCCACGGAAAACAGCCAGTGATGATGATAATACTGATGATTCTCGGCCTCCAAATCTGCTGTGTGTAGTGAAGGGGGAGGCAGAATCTATTGAGAGTGATTCTTTGACAAGAGAACTACTAGACACAAATAAATGTTATATTCTTGATTGTGGTTTGGAAGTTTTTGTTTGGACGGGAAGAAGCACCTCTCTCGATGAAAGAAAAAGTACAAGTGCAGCTGCAGAAGAATTAATCAGTGGCTCTGATCGACTAAAATCCCACATAATTCGTGTGATTGAAGGATTTGAAACTGTGATGTTCAAGTCCAAATTCGATTCTTGGCCACAAACACCTAATGTAACTGTATCAGAAGATGGTCGTGGCAGGGTGGCAGCACTTCTAAGGCGTCAAGGAGTGGATGTCAAGGGTCTGTTGAAAGTTGATCCAGTAAAAGAAGAACCTGAACCCCACATTGATTGCACAGGACGTTTCCAGGTTTGGCGGGTGAATGGCAAGGAAAAGATTCTCCTTGGAGATTCTGATTATTCAAAACTTTATAGTGGTGATTGCTATGTCTTTCTCTACTCGTATCCAGGAGAAGATCGAGAAGAGCATCTTGTAATGACATGGATTGGAAAGAACAGTGTTGAGGAAGAAAGAGCTTCAGCTATTTCAATGGCAAGCAAAATTGTTGATACAATGAAGTTTATTCCTGCCCAGGCTCGAATTTATGAAGGGAATGAACCAATTCAGTTTTATTCTATCCTCCAAAGCTTTATTGTTTTTAAGGGTGGTCTTAGTGATGGATATAAGAATTACATTACGGAGAAGGAAATTCCAGATGACACTTACAAGGAAGATGGCGTAGGACTGTTCCGCATCCAGGGCTCTGGACCTGAAAGTATGCAAGCTATACAAGTCGAAACAGTTGCTTCCTCCTTGAATTCATCATATTGCTATATACTTCATGATGGGCCCACAGTCTTCACTTGGCTGGGAAGTCTTACAAATTCAGATGACCATGAACTAGTTGATAGGATGCTGGATTTGATAAAGCTGATATTGGTTAATGTTTCAGATCTCAACTTTGAGTTTCTTGACATTTTGAACTTTCAGGAGCCGGAATTACAAACCAAACCACAAAAGGAAGGTTCAGAGTCTGAACAGTTTTGGGATTTGTTAGGAGGAAAATCAGAATATCCCAGTCAAAAGATTGCAAGGGATGCTGAAGGTGATCCTCGCCTATTTTCTTGCAACTACTCAAAAGTTCTGAGTTATGGAGATCCTGTGGTGACAGAAGTATACAACTTTTCCCAGGATGATTTAATGACTGAAGATATTATGATCATAAATTGTCACTCAGAAATCTTTGTCTGGATTGGCCAGCAGATTGACCTCAAGAGTAGAACAAAAGCTCTAACAATTGGTGAGAAATTTCTTGAGCGTGATTTTTGTATGGAAAATTTATCTCGTGAAGCTCCCATATATGTTGTCATGGAAGGAAGTGAACCTCCTTTCTTCACTCGTTTCTTTAAATGGGAATCTGCAAAATCTGGGAGACCAAAACGGAGAAAAACAGTGTCTTATGGAGGAAGGTCCGGTAGTGCACCGGAAAAAGCCCAGCGATCTCGCAGTGTGTGCGTTACTCCTGATCGTGTTCGTGTGAGGGGCAGGTCTCCAGCCTTTAATGCATTAGCAGCTGCATTTGAAGGTCCCAAGGACAGAAACCTTTCAACTCCACCTCCTATGGTTAGAAAGCTGTATGCAAAATCTCTGACACCAGACTCAGCAACATTGGCACCCAAATCTGCAGTTATAGCTGCACTTAGTTCTAGTTTTGAATCATTCCGTCCATCAAAAGATAATTTTATACCTCGATCATTCAAAGTGAACAAAGAGGCCTCAAAGCCGGAGACAAGCAATAGGAAAGATTCTATGAGCAGTATACAAGAAGATGTGAAAGAGGGTGAAGCTGAAGATGATGAAGGTCTCCCAGTTTATCCATATGAACGCCTCAAAATAGGATCTGAAGATCCTGTAGCAGACATTGATGTGACCAGGAGAGAGGCTTATATGTCAGTTGAGGAGTTCAAAGAGAAGTTTGGAATGACAAAAAAGGATTTCAACAAGTTGCCCAAATGGAAACAGAACAAACTCAAGATGACCATTCAGTTATTTTGA 2901 0.4071 MIEKFENVTTKKEHYSMLVYEISCTVGILWYILAWLYKTKKVDYYFFLTVYSGIEIWRIENLKPVSVPTSSYGKFYTGDSYVILKTTASKSGALRHDIHYWLGKDTSQDEAGVAAIKTIELDAALGGRAVQYRESQGHETEKFLSYFKQCIIPLEGGVASGFKHVPFARSTLTHDDVFILDTQSKIFQFNGSNSSIQERAKALEVLQYIKDNYHDGKCEVASVEDGKLMADADAGEFWAVFGGFAPLPRKTASDDDNTDDSRPPNLLCVVKGEAESIESDSLTRELLDTNKCYILDCGLEVFVWTGRSTSLDERKSTSAAAEELISGSDRLKSHIIRVIEGFETVMFKSKFDSWPQTPNVTVSEDGRGRVAALLRRQGVDVKGLLKVDPVKEEPEPHIDCTGRFQVWRVNGKEKILLGDSDYSKLYSGDCYVFLYSYPGEDREEHLVMTWIGKNSVEEERASAISMASKIVDTMKFIPAQARIYEGNEPIQFYSILQSFIVFKGGLSDGYKNYITEKEIPDDTYKEDGVGLFRIQGSGPESMQAIQVETVASSLNSSYCYILHDGPTVFTWLGSLTNSDDHELVDRMLDLIKLILVNVSDLNFEFLDILNFQEPELQTKPQKEGSESEQFWDLLGGKSEYPSQKIARDAEGDPRLFSCNYSKVLSYGDPVVTEVYNFSQDDLMTEDIMIINCHSEIFVWIGQQIDLKSRTKALTIGEKFLERDFCMENLSREAPIYVVMEGSEPPFFTRFFKWESAKSGRPKRRKTVSYGGRSGSAPEKAQRSRSVCVTPDRVRVRGRSPAFNALAAAFEGPKDRNLSTPPPMVRKLYAKSLTPDSATLAPKSAVIAALSSSFESFRPSKDNFIPRSFKVNKEASKPETSNRKDSMSSIQEDVKEGEAEDDEGLPVYPYERLKIGSEDPVADIDVTRREAYMSVEEFKEKFGMTKKDFNKLPKWKQNKLKMTIQLF 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0559 966 SMART VHP_1 931 966 IPR003128 GO:0003779|GO:0007010
Lele17g0559 966 ProSiteProfiles Headpiece (HP) domain profile. 901 966 IPR003128 GO:0003779|GO:0007010
Lele17g0559 966 CDD gelsolin_S5_like 527 639 - -
Lele17g0559 966 SUPERFAMILY VHP, Villin headpiece domain 892 966 IPR036886 GO:0003779|GO:0007010
Lele17g0559 966 PANTHER VILLIN 53 956 IPR007122 GO:0051015
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 626 752 - -
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 164 249 - -
Lele17g0559 966 Gene3D Villin headpiece domain 904 966 IPR036886 GO:0003779|GO:0007010
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 521 645 - -
Lele17g0559 966 Gene3D Severin 391 532 IPR029006 -
Lele17g0559 966 CDD gelsolin_S1_like 53 157 - -
Lele17g0559 966 Gene3D Severin 533 643 IPR029006 -
Lele17g0559 966 PRINTS Gelsolin family signature 333 354 IPR007122 GO:0051015
Lele17g0559 966 PRINTS Gelsolin family signature 679 701 IPR007122 GO:0051015
Lele17g0559 966 PRINTS Gelsolin family signature 446 464 IPR007122 GO:0051015
Lele17g0559 966 PRINTS Gelsolin family signature 421 437 IPR007122 GO:0051015
Lele17g0559 966 PRINTS Gelsolin family signature 708 727 IPR007122 GO:0051015
Lele17g0559 966 FunFam Villin-4 258 364 - -
Lele17g0559 966 Gene3D Severin 163 257 IPR029006 -
Lele17g0559 966 Gene3D Severin 258 365 IPR029006 -
Lele17g0559 966 CDD gelsolin_S3_like 271 353 - -
Lele17g0559 966 CDD gelsolin_S4_like 398 495 - -
Lele17g0559 966 Pfam Gelsolin repeat 163 227 IPR007123 -
Lele17g0559 966 Pfam Gelsolin repeat 280 347 IPR007123 -
Lele17g0559 966 Pfam Gelsolin repeat 63 144 IPR007123 -
Lele17g0559 966 Pfam Gelsolin repeat 673 747 IPR007123 -
Lele17g0559 966 MobiDBLite consensus disorder prediction 762 784 - -
Lele17g0559 966 FunFam Gelsolin 528 643 - -
Lele17g0559 966 Gene3D Severin 644 767 IPR029006 -
Lele17g0559 966 FunFam Gelsolin 45 164 - -
Lele17g0559 966 Pfam Villin headpiece domain 931 966 IPR003128 GO:0003779|GO:0007010
Lele17g0559 966 MobiDBLite consensus disorder prediction 871 893 - -
Lele17g0559 966 Gene3D Severin 31 162 IPR029006 -
Lele17g0559 966 SMART VILL_6 151 244 IPR007122 GO:0051015
Lele17g0559 966 SMART VILL_6 653 754 IPR007122 GO:0051015
Lele17g0559 966 SMART VILL_6 264 354 IPR007122 GO:0051015
Lele17g0559 966 SMART VILL_6 52 150 IPR007122 GO:0051015
Lele17g0559 966 SMART VILL_6 402 499 IPR007122 GO:0051015
Lele17g0559 966 SMART VILL_6 529 637 IPR007122 GO:0051015
Lele17g0559 966 CDD gelsolin_S6_like 652 753 - -
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 395 538 - -
Lele17g0559 966 MobiDBLite consensus disorder prediction 868 905 - -
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 234 359 - -
Lele17g0559 966 SUPERFAMILY Actin depolymerizing proteins 48 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0559 Lele-ChrLele17 17723730 17731410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0559 17 17723730 17731410 Lele19g0983 19 6182117 6191280 hybridization
Lele17g0559 17 17723730 17731410 Lele20g0465 20 12330286 12337848 hybridization