Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0735 ATGGAAGAGCAACAAGGTAAAAAGGAGACTGGTCTGAGGGAAGAAAAGAAAACTGAAAACTCGGAACTTGGAAGGCGGGATGGCCAGCTGGGTGGATATGTAAAAGGAAGCTCAAACGGCTGCGGTGCTCTGTCTCTGCTTGGGTCGAGTAGAGTCCTCGGGCCCCAAATTTCCTCGTCTGATCCGGGTGTTGGAGCCTCTGCTCTCGTGCCTTGCTTGCTTGGTTGCCTGCGAATTGAAGAACTCATTATGGTGGCCACTGCTGCTACATCATTTTTCCCTGTTACTTCACCCTCACCAGACTCTGGTGCGAAGAGTACCAAACTTGGTGGTAAGTTCAGAGGACTTATATCCAAATCTACAACTTCTGGTGGCTTGCAAGTTAAGGCAAATGCTCAAGCCCCACCAAAGATTAATGGAGTTGCTACATCTTTGGAAAGTGTGAAACATGAAAACGATTCCCCATCATCCGCCCCAAGGACTTTTATCAACCAGTTGCCTGATTGGAGCATGCTTCTAGCTGCCATCACAACAATTTTCTTGGCAGCTGAGAAGCAGTGGATGATGCTTGATTGGAAGCCAAAGAGACCTGACATGCTTATGGATCCATTTGGTATAGGAAAAATTGTTCAGGATGGTCTTGTGTTTCGGGAGAACTTTTCTATTAGGTCCTATGAAATAGGTGCTGATAGAACAGCATCTATTGAGACGTTAATGAACCATTTGCAGGAAACGGCCCTTAATCATGTTAAGAGTTCTGGGCTTCTTGGCGATGGTTTTGGTTCTACACAAGAGATGTGTAAAAAGAACTTGATATGGGTGGTTACACGGATGCAGGTTGTGGTTGATCGTTATCCTACATGGGGTGATGTTGTTCAAGTAGACACTTGGGTTTCTGCTTCGGGGAAGAATGGCATGCGTCGTGATTGGGTTGTGCGGGACTGCAAAACTGGTGAAACATTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAACTGACAAGGAGGCTGTCTAAAATACCAGAAGAAGTTAGAGGAGAGATAGGGCCCTACTTTGTGAACTCTGATCCTGTTGTGGAAGAGGATAACAGAAAACTCCCTAAACTTGATGACAACACAGCAGACTATAAGCGTACAGGCTTGAGTCCGCGGTGGAATGACTTAGATGTCAACCAGCATGTTAACAATGTGAAGTACATTGGCTGGATCCTGGAGAGTGCTCCTCAGTCGATTTTAGAGAGCCACGAGCTCTGCTCCATGACTCTGGAGTACCGGAGGGAGTGTGGTAGGGACAGTGTACTGCAGTCGCTGACAGCTGTCTCTAGCACTGATGTCGGTAATTTAGCTCAAAGCGGAGGTTTAGAGTGCAAGCATTTGCTTAGGCTTGAAGATGGTGCTGAGATTGTCAGAGGCAGGACAGAGTGGAGGCCAAAACACCCCAACAACCTGTTTGTCAACAATCAGATTCCAGCGGAAAGCACCTAG 1488 0.4691 MEEQQGKKETGLREEKKTENSELGRRDGQLGGYVKGSSNGCGALSLLGSSRVLGPQISSSDPGVGASALVPCLLGCLRIEELIMVATAATSFFPVTSPSPDSGAKSTKLGGKFRGLISKSTTSGGLQVKANAQAPPKINGVATSLESVKHENDSPSSAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPKRPDMLMDPFGIGKIVQDGLVFRENFSIRSYEIGADRTASIETLMNHLQETALNHVKSSGLLGDGFGSTQEMCKKNLIWVVTRMQVVVDRYPTWGDVVQVDTWVSASGKNGMRRDWVVRDCKTGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIGPYFVNSDPVVEEDNRKLPKLDDNTADYKRTGLSPRWNDLDVNQHVNNVKYIGWILESAPQSILESHELCSMTLEYRRECGRDSVLQSLTAVSSTDVGNLAQSGGLECKHLLRLEDGAEIVRGRTEWRPKHPNNLFVNNQIPAEST 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0735 495 Gene3D Hotdog Thioesterase 206 483 - -
Lele19g0735 495 MobiDBLite consensus disorder prediction 1 24 - -
Lele19g0735 495 Pfam Acyl-ACP thioesterase 213 477 IPR002864 GO:0006633|GO:0016790
Lele19g0735 495 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 134 481 IPR045023 GO:0006633|GO:0016297
Lele19g0735 495 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 210 361 IPR029069 -
Lele19g0735 495 CDD 4HBT 216 332 - -
Lele19g0735 495 FunFam Acyl-[acyl-carrier-protein] hydrolase 207 482 - -
Lele19g0735 495 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 378 479 IPR029069 -
Lele19g0735 495 MobiDBLite consensus disorder prediction 1 31 - -
Lele19g0735 495 Pfam Acyl-ATP thioesterase 84 202 IPR021113 GO:0016790
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0735 Lele-ChrLele19 4292927 4297199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0735 84 481 Acyl Lipid Metabolism Gene Families AT1G08510 75.743 0.0 620
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0832 17 19712406 19716578 Lele19g0735 19 4292927 4297199 hybridization
Lele18g0693 18 4211385 4216416 Lele19g0735 19 4292927 4297199 hybridization