Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0592 ATGGCTAGTGTTAGAGGTGGAAGACGGGTTGGAGTCAGAAAGAGCTCACGTGCTCCTCTCGTGGAACAGATAGTTCCTAATTCTGCTTGGACAGAGGACTCCTCTGGCCATTATCTTCTAGTTGATCTTCCTGGATTCAAGAAGGAAGAGGTGAAGCTTCAGGTGGAGGGCTCTGGTTATATCATAGTAAGAGGAGAAAGGCAGGTGAACCCAGAGAAATGTGTTCGATTTGAGCTGATTTTTCCAGTTCCAAAGGATTCAGATACTGATAACATAGCTGGCAAATTTGATGGTGAGATCCTTTATGTGACTATCACCAAGAGATCAGCTGCACAAGAGAACACAGAAACTGAACCAGCTAATATGCCTGCAAATGGAAGTGTCAGGACACAAGAAGAAAATCACAGAAGCGATGATAGTCAACAAAGATATCAAAACAGACAACAGGACCGCCATATGAACGAGGAAACAAGAAATGAAGTCACTCCCGTGGGTAGTTTTCCTGCAGAGTTGATAAGCAAGTGGGAAAAAGAACCTACCATATTAACAAGTGCAGTCAAAGTTTTAAGACAGAACAAGGGAATTGTCATCACTGCTGTTTTAGCCTTTTCCTTAGGCTTGTTCGTTTCTCACAAGTTTCAATCCTCAACAGAAGCATAA 660 0.4273 MASVRGGRRVGVRKSSRAPLVEQIVPNSAWTEDSSGHYLLVDLPGFKKEEVKLQVEGSGYIIVRGERQVNPEKCVRFELIFPVPKDSDTDNIAGKFDGEILYVTITKRSAAQENTETEPANMPANGSVRTQEENHRSDDSQQRYQNRQQDRHMNEETRNEVTPVGSFPAELISKWEKEPTILTSAVKVLRQNKGIVITAVLAFSLGLFVSHKFQSSTEA 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0592 219 MobiDBLite consensus disorder prediction 111 162 - -
Lele19g0592 219 MobiDBLite consensus disorder prediction 111 130 - -
Lele19g0592 219 Gene3D - 10 115 IPR008978 -
Lele19g0592 219 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 19 123 IPR002068 -
Lele19g0592 219 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 29 111 - -
Lele19g0592 219 MobiDBLite consensus disorder prediction 131 158 - -
Lele19g0592 219 SUPERFAMILY HSP20-like chaperones 20 113 IPR008978 -
Lele19g0592 219 Pfam Hsp20/alpha crystallin family 30 114 IPR002068 -
Lele19g0592 219 CDD ACD_sHsps-like 30 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0592 Lele-ChrLele19 3402150 3402983 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0968 17 20605839 20606672 Lele19g0592 19 3402150 3402983 hybridization
Lele18g0565 18 3335642 3336559 Lele19g0592 19 3402150 3402983 hybridization