Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0559 ATGGCTCCCTCTTCAGCTTCGGGTTATAGCCTCAAACAGAAGGTGTTCACTTGCCTCACCAAGCTCTCCGACCGCGATACTCAGTCCCTCGCCGCCAATAAGCTCGAGTCCATTGCTCGGAACCTTGATTCAACCTCCGTGCCAGTGTTCCTCTCGTGCATTCACTCCACTAATTCATCGGACAAATCGCCGGTTCGTAAACAATGCGTACACCTCATGCAGGTTCTTTCCGAAACGCACGGAAACACACTCTCTCCCTATCTTTCCAAAATCCTTGCACATATAGTTCGCCGGCTTCGTGACCCGGACTCGTCGGTTCGATCTGCTTGTGTAACTTCGGTGTCGGCATTGTCTGCACACATCACCAAGCAACCGTTTGCTTCTTTCATGAAGCCGCTAACTGAGGCTCTGTTCACTGAGCAGGACCAGAATTCACAGTTAGGCGCGGCGCTTTGTTTAGCATCTGCCATTGATGCAACCCCTGACCCGGACCCCGCGAGCTTGGCGAAGCTCTTGCCGAGGTTCGAGAAGTTGTTGAGAAGCCGGAGCTTTAAGGCCAAGCCGGCGGTGTTGACGCTTATCGGAAGTGTTATTGAAGCCGGTGGACTATGCAGTCATGAGGCTTTGAGCAATTTGGTTCCATGCATGGTGGAATTCTTGAGCAGCAACGACTGGTCGGCAAGGAAGGCTTCGGTCGAGACATTGACGAAGTTGGCGATAGTGGAGAGGGATGTGTTATCAGAATTCAAGGCTGGATGTTTGAATGTCTTTGAGAATCGACGATTCGACAAGGTAAAGGTAGTTCGGGAGGTTATGAATCATATGTGTGAGGCATGGAAGCAGATTCCTGATATATCGGATGGATTCTCTCCACCACCTAAATCACAATCTTCTTCCTCAGAAAATGTAAGTGATGGGCGCTATCCGGCATTCTCACAGAATTCATGTAGTCCTGGTTCTGTAATGCCTCGATTGTGGAAGAAATCCAATCCAGTTAGCAAATCAAGCCCTGATAGTTCTTCTGTGAGCAATGCTAATAAGTTAAGCTTTAGTAACAAGAGAACGAGCTCAAGTGAGTTGCCAAAACTAAGCCATAAGAATCGGGACGTTCAAGTTGCTGTATCAAGTTCTCCCTCTCCTATAGGTGCTTACCAGAGTTATCTTGAAGAGAGAAATGAAATGAAACTGGAAAAAAACAAAAAGGAGAAAAGTAACTTTTCAAGGCCAGAACTGAAACGGCCTCTTCTCAGCAAAAAGCCTGATGAAAGAAAACGCACGTTTGGTGGCTCCAAAACTGGATCTCGTGTAGTTCCATGTCATGAAGAGAGCCAAGATTCAGTTCCTATCAGTAATGTTGCTAAAGATTTCCATAGGAATGACAAAGACTGTGACGAGTTAGCTCTAATCCGCAGCCAGTTATTTCAAATTGAAAAGCAGCAGTCAAATCTACTTAATCTTCTAAAGAGATTCATGAATAGCTCACAGAATGGAATGCAATCATTAGAGTCTCGTGTACATGGCCTTGAGTTAGTATTGGAAGGGCTCTCTCATGATTTAGCTGTATCAAATAAAAGGGTGACTCATTTTGATGCTCCCGGAGATTCCTGCTGGTTGCCACCCGGTGCCGAAATTCTCAGCTCCAAATTCTGGAGGAAAACACAGGGCCGGTACCCATACTCCCAGTTCTCTAGATGTCGTGGCACCCCATCACAAGCTGCCATGTGGTACAGAGCGCAAATGAAAGGTGATGCTGAAACTGAGTTCACAAATCAAAACCGCAGACTCCATGGTGATGGAGGGTTCGTCACAAATCCGATGGCGACTTCGTGCGTGAGGAGAGCCAATGAATAA 1851 0.4695 MAPSSASGYSLKQKVFTCLTKLSDRDTQSLAANKLESIARNLDSTSVPVFLSCIHSTNSSDKSPVRKQCVHLMQVLSETHGNTLSPYLSKILAHIVRRLRDPDSSVRSACVTSVSALSAHITKQPFASFMKPLTEALFTEQDQNSQLGAALCLASAIDATPDPDPASLAKLLPRFEKLLRSRSFKAKPAVLTLIGSVIEAGGLCSHEALSNLVPCMVEFLSSNDWSARKASVETLTKLAIVERDVLSEFKAGCLNVFENRRFDKVKVVREVMNHMCEAWKQIPDISDGFSPPPKSQSSSSENVSDGRYPAFSQNSCSPGSVMPRLWKKSNPVSKSSPDSSSVSNANKLSFSNKRTSSSELPKLSHKNRDVQVAVSSSPSPIGAYQSYLEERNEMKLEKNKKEKSNFSRPELKRPLLSKKPDERKRTFGGSKTGSRVVPCHEESQDSVPISNVAKDFHRNDKDCDELALIRSQLFQIEKQQSNLLNLLKRFMNSSQNGMQSLESRVHGLELVLEGLSHDLAVSNKRVTHFDAPGDSCWLPPGAEILSSKFWRKTQGRYPYSQFSRCRGTPSQAAMWYRAQMKGDAETEFTNQNRRLHGDGGFVTNPMATSCVRRANE 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0559 616 Coils Coil 384 404 - -
Lele19g0559 616 MobiDBLite consensus disorder prediction 396 443 - -
Lele19g0559 616 FunFam TORTIFOLIA1-like protein 3 isoform A 2 357 - -
Lele19g0559 616 SUPERFAMILY ARM repeat 15 280 IPR016024 -
Lele19g0559 616 MobiDBLite consensus disorder prediction 290 320 - -
Lele19g0559 616 MobiDBLite consensus disorder prediction 329 358 - -
Lele19g0559 616 Gene3D - 10 365 IPR011989 -
Lele19g0559 616 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 4 572 IPR033337 GO:0005874|GO:0008017
Lele19g0559 616 MobiDBLite consensus disorder prediction 287 382 - -
Lele19g0559 616 MobiDBLite consensus disorder prediction 396 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0559 Lele-ChrLele19 3214889 3217262 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1001 17 20793053 20795484 Lele19g0559 19 3214889 3217262 hybridization
Lele18g0534 18 3153320 3156165 Lele19g0559 19 3214889 3217262 hybridization