Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0443 ATGGGGAAGAAGACGAAGAAGCCCGGTAAAGGCAAGGAGAAAACAGATAGAAAAACTGCAAAAGCAGAGGAGAAGAGAGCTCGCAGGGAGACCAAGAAGCTTTCCCCAGAGGACGATATCGATGCCATATTGTTAAGTATACAAAAGGAGGAAGCCAAAAAGAAGGAAGTTCATGTTGAAGAGAATGTTCCTGCACCTTCTCCTCGATCCAACTGTACGCTCACAGTTAATCCCTTGAAAGAGACAGAGTTGATTCTTTATGGTGGTGAATTTTACAACGGTAACAAGACTTTTGTCTATGGTGATCTTTACCGATATGATGTTGAGAAGCTGGAATGGAAATTAATTTCAAGTCCTAATAGTCCTCCTCCTCGCAGTGCTCATCAGGCAGTTGCTTGGAAGAATTATCTTTATATTTTTGGCGGAGAATTCACATCTCCAAACCAAGAACGATTTCATCATTATAAGGACTTTTGGATGTTGGACCTGAAAACAAATCAATGGGAACAACTTAATTTGAAAGGGTGCCCTAGTCCACGCTCAGGACATCGAATGGTGTTGTACAAGCACAAGGTCATTGTTTTTGGCGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTCGATCAATATAAGTGGCAAGAAATAAAACCCAAGCCTGGTGCAATGTGGCCAGGTGGGCGAAGTGGTTTTCAATTATTTATTTTTTTGTACGGTGGCTATTCAAAAGAAGTTTCATCTGATAGGAATATCTCTGAGAAAGGGATTGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTCAAGAAAAGTGGAATGCCTCCAGGGCCTCGTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGTTGTGCTATTTGGAGGTGTTGTGGATATGGAAGTTGAAGGTGATAAAATGATGAGCTTGTTCTTAAATGAGCTTTATGGCTTTCAATTAGATAATAATCGCTGGTATCCACTGGAGTTAAGAAAGGAGAAGTCAACGAAAGATAAGTTAAAAAAGAATGAACGGAAGCCTATAGATGTTGCTGATGACAAAACAAATCCTCAATTGGGAGCAAGAGAAGAAAATGAGAATTCAGAATGCCAAGAAGAAGCAACCAACGTGGGAGTCAACATTGATAATTTATCCCAGAATATTAAATCAAATATGACTATCGCTGATAGTCCAACAGCTGAGTTTGAAAGGAACCTGCAGGAATCTGGTGTCAGCTTGGACACTCAAAGTTCCTTGCCTGAGGTGGTGAAGCCTTGTGGACGTATTAATTCATGCATGGTTGTTGGGAGAGATACATTATATTTATATGGCGGAACAATGGAGATTAAGGATCAAGAAATCACTCTTGATGACTTGTATACTCTGAATCTTAGCAAACTTGATGAATGGAAGTGCATCAAACCGGATGAATCAGTTAAAGTGGGAGATGCTGTTGCTTTGATTAAGGGTGGGGTGAAAAATCTGCGGAGAAAAGAAAGGAGGTCACGAATAGAACAGATCAGAGCAAGCCTTGGCTTGTCAGACTCGCAAAGAACACCTATGCCAGGAGAATCCTTGAGGGATTTCTATAGACGTACAAATTTGTATTGGCAAATGGCTGCTCATGAACATACTCAGCACACCGGAAAGGAACTCCGCAAGGATGGGTTTGATCTTGCTGAAGCTCGGCACAGGGAGTTAAAGCCTATTCTTGACGAGCTGGCCCTATTAGAAGCTGAGCAGAAAGCTGAAGAGGACGAAGGACCCGAAACTAGTTCAAAGAAAAGAGGCAAGAAGAAAACTAGAAACTGA 1851 0.416 MGKKTKKPGKGKEKTDRKTAKAEEKRARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKVIVFGGFYDTLREVRYYNDLFVFDLDQYKWQEIKPKPGAMWPGGRSGFQLFIFLYGGYSKEVSSDRNISEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPRAGFSMCVHKRRVVLFGGVVDMEVEGDKMMSLFLNELYGFQLDNNRWYPLELRKEKSTKDKLKKNERKPIDVADDKTNPQLGAREENENSECQEEATNVGVNIDNLSQNIKSNMTIADSPTAEFERNLQESGVSLDTQSSLPEVVKPCGRINSCMVVGRDTLYLYGGTMEIKDQEITLDDLYTLNLSKLDEWKCIKPDESVKVGDAVALIKGGVKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARHRELKPILDELALLEAEQKAEEDEGPETSSKKRGKKKTRN 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0443 616 MobiDBLite consensus disorder prediction 349 382 - -
Lele19g0443 616 MobiDBLite consensus disorder prediction 1 35 - -
Lele19g0443 616 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 609 - -
Lele19g0443 616 Pfam Galactose oxidase, central domain 441 487 - -
Lele19g0443 616 Pfam Galactose oxidase, central domain 68 122 - -
Lele19g0443 616 Pfam Domain of unknown function (DUF4110) 525 610 IPR025183 -
Lele19g0443 616 MobiDBLite consensus disorder prediction 592 607 - -
Lele19g0443 616 MobiDBLite consensus disorder prediction 12 35 - -
Lele19g0443 616 SUPERFAMILY Kelch motif 82 485 IPR015915 GO:0005515
Lele19g0443 616 Pfam Galactose oxidase, central domain 135 187 - -
Lele19g0443 616 Pfam Galactose oxidase, central domain 243 300 - -
Lele19g0443 616 Pfam Galactose oxidase, central domain 191 241 - -
Lele19g0443 616 MobiDBLite consensus disorder prediction 349 386 - -
Lele19g0443 616 MobiDBLite consensus disorder prediction 592 616 - -
Lele19g0443 616 Gene3D - 46 361 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0443 Lele-ChrLele19 2529968 2542110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele19g0443 166 338 Acyl Lipid Metabolism Gene Families AT3G05420 26.984 6.04e-10 60.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1116 17 21453747 21463215 Lele19g0443 19 2529968 2542110 hybridization
Lele18g0424 18 2484282 2492065 Lele19g0443 19 2529968 2542110 hybridization