Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0424 ATGGGGAAGAAGACGAAGAAGCCCGGGAAAGGCAAGGAGAAAACAGAGAGAAAAACTGCAAAAGCAGAGGAGAAGAGAGCTCGCAGGGAGACCAAGAAGCTTTCCCCAGAGGACGATATCGATGCCATATTGCCTCCTAGTTTTGCAAATGACCTTTTGCTTCACTGGGTTCTATTGTGTGATGCCCAGAATGGTGGCAGAAGTGTTTCCTGTATACAAAAGGAGGAAGCCAAAAAGAAGGAAGTTCATGTTGAAGACAATGTTCCCGCACCTTCTCCTCGATCCAACTGTACGCTCACGGTTAATCCCTTGAAAGAGACAGAGTTGATTCTTTATGGTGGTGAATTTTACAATGGTAACAAGACTTTTGTCTATGGTGATATTTACCGATATGATGCGGAGAAGCTGGAATGGAAATTAATTTCAAGTCCTAATAGTCCTCCTCCTCGCAGTGCTCATCAGGCAGTTGCTTGGAAGAATTATCTTTATATTTTTGGTGGTGAATTCACATCTCCAAACCAAGAACGATTTCATCATTACAAGGACTTTTGGATGTTGGACCTGAAAACAAATCAATGGGAACAACTTAATTTGAAAGGGTGCCCTAGTCCACGCTCAGGACATCGAATGGTTGGCTCAGTATTGTACAAGCACAAGATTATTGTTTTTGGTGGCTTCTATGACACTCTTAGAGAAATTTTTTTGTACGGGGGCTATTCAAAAGAAGTTTCATCTGATAAGAATATCTCTGAGAAAGGGATTGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAAGGGAACAAGGTCAAGAAAAGTGGAATGCCTCCAGGGCCTCGTGCTGGGTTTTCCATGTGTCTTCATAAGAAGAGGGCTGTGCTATTTGGAGGTGTTGTGGATATGGAAGTTGAAGGTGATAAAATGATGAGCTCGTTCTTAAATGAGCTTTATGGCTTTCAATTAGATAATAATCGCTGGTATCCACTGGAGTTAAGAAAGGAGAAGTCAACGAAGGATAAGGTGGTGAAGCCTTGTGGACGTATTAATTTCTGCATGGTTGTTGGGAGAGATACATTATACTTATATGGTGGAACAATGGAGATTAAGGATCGAGAAATCACTCTTGATGACTTGTATACTCTCAATCGTATACTCTCAATCTTAGCAAACTTGATGAATGGAAGTGCATTAAACCGATTTTCTTCAACCCAGGCATCAGAATCTGAATGGGTGGAGGTTTCAGATGATGATAATGAAGATGAAGATGAAGATGATGAAGAAGATGGTGAAGATGAATCTGATTGTGATACCCTAAGTGATGATGATGAGGATGAGGAAGAGAACGAATCAGATAAAGTGGGAGATGCTGTTGCTTTGATTAAGGGTGGGGTGAAAAATCTGCGGAGAAAAGAAAGAAGGTCACGAATAGAACAGATAAGAGCAAGCCTTGGCTTGTCAGACTCACAAAGAACACCAACGGCTCCAATCTTGTCTTTCTTTGACCATACCTGTTTACTGATTGTTTGTTGCATATTTGATGTAAAGCCAGGAGAATCCTTGAGGGATTTCTATAGACGTACAATTTTGTATTGGCAAATGGCTGCTCATGATCATACTCAACACACTGGAAAGGATGGGTTTGATCTTGCTGAAGCTCGGTACAGGGAGCTAAGCCTATTCTTGACGAGGCTTTATGGGGAACTCACATTGCACTTGAGAGAAGTCCATGGCCTTGCAATTTATCCTTAA 1755 0.416 MGKKTKKPGKGKEKTERKTAKAEEKRARRETKKLSPEDDIDAILPPSFANDLLLHWVLLCDAQNGGRSVSCIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDIYRYDAEKLEWKLISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDLKTNQWEQLNLKGCPSPRSGHRMVGSVLYKHKIIVFGGFYDTLREIFLYGGYSKEVSSDKNISEKGIVHSDMWSLDPKTWEGNKVKKSGMPPGPRAGFSMCLHKKRAVLFGGVVDMEVEGDKMMSSFLNELYGFQLDNNRWYPLELRKEKSTKDKVVKPCGRINFCMVVGRDTLYLYGGTMEIKDREITLDDLYTLNRILSILANLMNGSALNRFSSTQASESEWVEVSDDDNEDEDEDDEEDGEDESDCDTLSDDDEDEEENESDKVGDAVALIKGGVKNLRRKERRSRIEQIRASLGLSDSQRTPTAPILSFFDHTCLLIVCCIFDVKPGESLRDFYRRTILYWQMAAHDHTQHTGKDGFDLAEARYRELSLFLTRLYGELTLHLREVHGLAIYP 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0424 584 Coils Coil 12 32 - -
Lele18g0424 584 Pfam Galactose oxidase, central domain 93 147 - -
Lele18g0424 584 MobiDBLite consensus disorder prediction 412 453 - -
Lele18g0424 584 MobiDBLite consensus disorder prediction 1 39 - -
Lele18g0424 584 Pfam Galactose oxidase, central domain 160 210 - -
Lele18g0424 584 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 232 - -
Lele18g0424 584 MobiDBLite consensus disorder prediction 12 39 - -
Lele18g0424 584 Pfam Domain of unknown function (DUF4110) 517 566 IPR025183 -
Lele18g0424 584 SUPERFAMILY Kelch motif 91 384 IPR015915 GO:0005515
Lele18g0424 584 MobiDBLite consensus disorder prediction 408 457 - -
Lele18g0424 584 Gene3D - 232 417 IPR015915 GO:0005515
Lele18g0424 584 Gene3D - 56 231 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0424 Lele-ChrLele18 2484282 2492065 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0424 142 384 Acyl Lipid Metabolism Gene Families AT3G05420 23.577 4.79e-07 50.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0424 18 2484282 2492065 Lele19g0443 19 2529968 2542110 hybridization