Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g1116 ATGGGGAAGAAAACGAAGAAGCCCGGTAAAGGCAAGGAGAAAACAGATAGAAAAACTGCAAAATCAGAGGAGAAGAGAGCTCGCAGGGAGACCAAGAAGCTTTCCCCAGAGGACGATATCGATGCCATATTGTTAAGTATACAAAAGGAGGAAGCCAAAAAGAAGGAAGTTCATGTTGAAGACAATGTTCCTGCACCTTCTCCTCGATCCAACTGTACGCTCACAGTTAATCCCTTGAAAGAGACAGAGTTGATTCTTTATGGTGGTGAATTTTACAATGGTAACAAGACTTTTGTCTATGGTGATCTTTACCGATATGATGTTGAGAAGCTGGAATGGAAATTAATTTCAAGTCCTAATAGTCCTCCTCCTCGCAGTGCTCATCAGGCAGTTGCTTGGAAGAATTATCTTTATATTTTTGGCGGAGAATTCACATCTCCAAACCAAGAACGATTTCATCATTACAAGGACTTTTGGATGTTGGACATGAAAACAAATCAATGGGAACAACTTAATTTGAAAGGGTGCCCTAGTCCGCGCTCAGGACATCGAATGGTATTGTACAAGCACAAGGTCATTGTTTTTGGCGGCTTCTATGACACTCTTAGAGAAGTGAGGTACTACAATGATCTATTTGTATTTGACCTCGATCAATATAAGTGGCAAGAAATAAAACCCAAGCCTGGTGCAATGTGGCCAGGTGGGCGAAGTGGTTTTCAATTATTTGTTTACCAAGATGAGATTTTTTTGTACGGTGGCTATTCAAAAGAAGTTTCATCTGATAAGAATATCTCTGAGAAGGGGATTGTTCATTCAGACATGTGGTCCCTTGATCCTAAGACTTGGGAATGGAACAAGGTCAAGAAAAGTGGAATGCCTCCAGGGCCTCTTGCTGGGTTTTCCATGTGTGTTCATAAGAGGAGGGCTGTACTATTTGGAGGTGTAGTGGATATGGAAGTTGAAGGTGATAAAATGATGAGCTTGTTCTTAAATGAGCTTTATGGCTTTCAGTTAGATAATAATCGCTGGTACCCACTGGAGTTAAGAAAGGAGAAGTCAACGAAAGATAAGTTAAAAAAGAATGAACGGAAGCCTATAGATGTTGCTGATGACAAAACAAGTCCTCAATTGGGAGCAAGAGAAGAAAATGAGGATTCAGAATGCCAAGAAGAAGCAAGCAACGTGGGAGTCAACATTGATAATTTATCCCAGAATATTAAATCAAATATGACTATCGCTGATAGTCCAACAGCTGAGTCTGAAAGGAACCTGCAGGAATCTGGTGTCAGCTTGGACACTCAAAGTTCCTTGCCTGAGGTGGCGAAGCCTTGTGGACGTATTAATTCCTGCATGGTTGTTGGGAGAGATACATTATACTTATATGGCGGAACAATGGAGATTAAGGATCAAGAAATCACTCTTGATGACTTGTATACTCTGAATCTTAGCAAACTTGATGAATGGAAGTGCATCAAACCGGCATCAGAATCTGAATGGGTGGAGGTTTCAGATGTTGATAATGAAGATGACGATGAAGATGATGAAGAAGATGGTGAAGATGAATCTGATGGTGATACCCTAAGTGATGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGGATGAATCAGTTAAAGTGGGAGATGCTGTTGCTTTGATTAAGGGTGGGGTGAAAAATCTGCGGAGAAAAGAAAGAAGGTCACGAATAGAACAGATCAGAGCAAGCCTTGGCTTGTCAGACTCGCAAAGAACACCTATGCCAGGAGAATCCTTGAGGGATTTCTATAGACGTACAAATTTGTATTGGCAAATGGCTGCTCATGAACATACTCAACACACCGGAAAGGAACTCCGCAAGGATGGGTTTGATCTTGCTGAAGCTCGGCACAGGGAGCTGAAGCCTATTCTTGACGAGCTGGCCCTATTAGAAGCTGAGCAGAAAGCTGAAGAGGACGAAGGGCCCGAAACTAGTTCAAAGAAAAGAGGCAAGAAGAAAACTAGAAACTGA 2010 0.4199 MGKKTKKPGKGKEKTDRKTAKSEEKRARRETKKLSPEDDIDAILLSIQKEEAKKKEVHVEDNVPAPSPRSNCTLTVNPLKETELILYGGEFYNGNKTFVYGDLYRYDVEKLEWKLISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWMLDMKTNQWEQLNLKGCPSPRSGHRMVLYKHKVIVFGGFYDTLREVRYYNDLFVFDLDQYKWQEIKPKPGAMWPGGRSGFQLFVYQDEIFLYGGYSKEVSSDKNISEKGIVHSDMWSLDPKTWEWNKVKKSGMPPGPLAGFSMCVHKRRAVLFGGVVDMEVEGDKMMSLFLNELYGFQLDNNRWYPLELRKEKSTKDKLKKNERKPIDVADDKTSPQLGAREENEDSECQEEASNVGVNIDNLSQNIKSNMTIADSPTAESERNLQESGVSLDTQSSLPEVAKPCGRINSCMVVGRDTLYLYGGTMEIKDQEITLDDLYTLNLSKLDEWKCIKPASESEWVEVSDVDNEDDDEDDEEDGEDESDGDTLSDDDDDEEEEEEEEDESVKVGDAVALIKGGVKNLRRKERRSRIEQIRASLGLSDSQRTPMPGESLRDFYRRTNLYWQMAAHEHTQHTGKELRKDGFDLAEARHRELKPILDELALLEAEQKAEEDEGPETSSKKRGKKKTRN 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g1116 669 Pfam Galactose oxidase, central domain 446 494 - -
Lele17g1116 669 Pfam Galactose oxidase, central domain 68 122 - -
Lele17g1116 669 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 662 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 12 36 - -
Lele17g1116 669 Gene3D - 44 364 IPR015915 GO:0005515
Lele17g1116 669 MobiDBLite consensus disorder prediction 645 669 - -
Lele17g1116 669 Pfam Galactose oxidase, central domain 135 187 - -
Lele17g1116 669 Pfam Galactose oxidase, central domain 191 243 - -
Lele17g1116 669 Pfam Domain of unknown function (DUF4110) 578 663 IPR025183 -
Lele17g1116 669 SUPERFAMILY Kelch motif 82 491 IPR015915 GO:0005515
Lele17g1116 669 MobiDBLite consensus disorder prediction 414 434 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 354 391 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 354 383 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 645 660 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 501 545 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 1 36 - -
Lele17g1116 669 MobiDBLite consensus disorder prediction 499 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g1116 Lele-ChrLele17 21453747 21463215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele17g1116 166 343 Acyl Lipid Metabolism Gene Families AT3G05420 26.455 6.28e-11 63.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1116 17 21453747 21463215 Lele19g0443 19 2529968 2542110 hybridization