Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0818 ATGTCACCCACCTCACTCTCTTCATTACACTCCTCTACTATCACTCCTTCTCTCTCCTTCTCTTTACTCTCTCCCACCTCTTCTGCGTTGTCTTCCTCTGACCAATGTCTTTCTCTCCCACGGCTCTCCCTCCGGACTCAACCTCTCCGCTCGCCCAACCTCTTCCGCGCTACCCATTTGAAAATTAACCCAAAATCCAAGAAGGATCTGAAAGTGAATTGTTCAATAAACGAGCCATTGAAGGTCATGATATCAGGTGCGCCTGCATCGGGCAAGGGAACTCAATGTGAATTGATTGTCCAGAAGTTTGGATTAGTGCACATATCGACTGGGGATTTGTTAAGAGCTGAAGTAGCAGCTGGGTCAGAAATTGGAAACAAAGCAAAGGAGTACATGAATGCTGGTCGCTTGGTTCCAGATGAAATCGTGACTTCTATGGTGACAGCGCGATTATCTCGTGAAGATGCAAAACAAAAAGGGTGGCTTCTTGATGGGTACCCTCGGAGTTTCGCCCAAGCAGAGGCTTTGGAACAACAGAAGATTAGGCCAGATATCTATATTGTATTAAATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGGAGAAGGCTAGATCCAGTGACAGGGAAGATTTATCATATAAAAAATTGTCCACCAGAGACTGAAGAAATCAAATCAAGGCTAATCACCCGTCCTGATGACACTGAAGGAAAAGTTGAGTCCCGGCTAGAAATATACAAGCAAAATTCAGAAGCTGTTTCTTCCACTTACTCAAGCATAACAAATAAGATCGATGGAAATCGCTCCAAAGACGTAGTTTTTAAAGAAATTGACTCTCTGTTGTCACAAGTGCAAAATGCCAAAGGGAAAACAATAAAGCCAGAAAAGTTGACTCCTGATATAAAGAAGGGGAAGGAACCATTAAGCCAGGATAAGTGGAGAGGAATTCCTACTAGACTAAATAACATTCCCCATTCCAGAGAGATCAGGAAATATTTCTATGATGATGTACTGCAAGCCACAGAGAGGGCTATAAAAGATGGAAAATCTCGGTTGAAGGTGGACATCAACATTCCCGAGCTGAACCCAGAAATGGACGTTTATCGAATTGGTACTTTGATGGAACTTGTTCGAGCTCTTGCCCTTTCATTTGCTGATGATGGGAAACGTGTTAAGGTTTGTGTGCAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCACTGCAGCTTGCTGGAACCCGAAAGATCTTAGAGTTTATGGATTGGGGTGATTATGGTGCAAAAGGGACCTTTATCAATATTGGTTCCATAGGTGCTGCAGAGGTTGATGAGCAAGATGACATGTATATCTTGGTGGCTCCTCAAAATGCTGTGGGGAATTGTATTATTGATGATCTAAGAGCGATGACCGATGCTGCTAAATACAGGCCAGTTATCCTAATCAATGCAAGGCTTAAAGATTTGCCGGGTTCCAGTGGTATAATGCAAACAATGGGACGGGAGAAAAGACTTGAGTATGCAGCATCATTTGAAAGTTGCTACTTCTTTCGTCTTCTCTATTATGCTGGAACTCAGTATCCCATAATGGGAGCTATCAGGATGTCTTATCCATTCCCTTACGAGCTTTACAAGAGAGTGGATGAATCATATGGAAAGGAGAAATATGTTCTGTTGTCAACATTTCCACAACGGCCTAGTACTGACGAAATTAACGACACCTTCCAAGGAAAACCAAGGACTGAAGCTAGGAAAGCTTCTGGGATTTGGGGTTTCTTGAGTGGCATTCTTTGA 1797 0.4318 MSPTSLSSLHSSTITPSLSFSLLSPTSSALSSSDQCLSLPRLSLRTQPLRSPNLFRATHLKINPKSKKDLKVNCSINEPLKVMISGAPASGKGTQCELIVQKFGLVHISTGDLLRAEVAAGSEIGNKAKEYMNAGRLVPDEIVTSMVTARLSREDAKQKGWLLDGYPRSFAQAEALEQQKIRPDIYIVLNVPDEILIDRCVGRRLDPVTGKIYHIKNCPPETEEIKSRLITRPDDTEGKVESRLEIYKQNSEAVSSTYSSITNKIDGNRSKDVVFKEIDSLLSQVQNAKGKTIKPEKLTPDIKKGKEPLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATERAIKDGKSRLKVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVDEQDDMYILVAPQNAVGNCIIDDLRAMTDAAKYRPVILINARLKDLPGSSGIMQTMGREKRLEYAASFESCYFFRLLYYAGTQYPIMGAIRMSYPFPYELYKRVDESYGKEKYVLLSTFPQRPSTDEINDTFQGKPRTEARKASGIWGFLSGIL 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0818 598 Gene3D - 76 294 IPR027417 -
Lele18g0818 598 Pfam Domain of unknown function (DUF1995) 331 573 IPR018962 -
Lele18g0818 598 FunFam Adenylate kinase, chloroplastic 76 287 - -
Lele18g0818 598 Hamap Adenylate kinase [adk]. 80 283 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 ProSitePatterns Adenylate kinase signature. 161 172 IPR033690 -
Lele18g0818 598 PRINTS Adenylate kinase signature 111 125 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 PRINTS Adenylate kinase signature 232 247 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 PRINTS Adenylate kinase signature 83 96 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 PRINTS Adenylate kinase signature 161 177 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 CDD ADK 81 274 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 Pfam Adenylate kinase 84 260 - -
Lele18g0818 598 PANTHER NUCLEOTIDE KINASE 65 280 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele18g0818 598 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 284 IPR027417 -
Lele18g0818 598 TIGRFAM adk: adenylate kinase 81 282 IPR006259 GO:0004017|GO:0005524|GO:0016776
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0818 Lele-ChrLele18 5126579 5131967 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0818 18 5126579 5131967 Lele19g0851 19 5150462 5155644 hybridization
Lele18g0818 18 5126579 5131967 Lele20g0605 20 13401421 13406745 hybridization