Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0851 ATGTCACTCACCTCGCTCTCTTCATTACGCTCTTCTACTATCACTCCCTCTCTCTCCTTCTCTTTACTCTCTACCACCTCTTCTTCGTTGTCTTCCTCTGACCAATGTCTCTCTCTTCCACGGCTCTCCCTTCGGACTCAACCTCTCCGCTCGCCCAACCTCTTCCACGTTACCCATTTGAGAATCAACCCAAAATCCAAGAAGGGTCTGAAAGTGAATTGTTCGATAAAAGAGCCATTGAAGGTCATGATATCAGGATCGCCTGCATCGGGCAAGGGAACTCAATGTGAATTGATTGTCCAGAAGTTTGGATTAGTGCACATATCAACTGGGGATTTGCTAAGAGCTGAAGTAGCAGCTGGGTCAGAAATTGGGAACAAAGCAAAGGAGTACATGAATGCTGGTCGCTTGGTTCCAGATGAAATTGTGACTGCGATGGTGACAGCGCGATTATCCTGTGAAGATGCAAAACAAAAAGGGTGGCTTCTTGATGGCTACCCTCGGAGTTTCGCCCAAGCAGAGGCTCTGGAACAACAAAAGATTAGGCCAGATGTCTTTATTGTACTAGATGTTCCTGATGAAATTCTGATCGACAGATGTGTTGGGAGAAGGCTAGATCCAGTGACAGGGAAGATTTATCATATAAAATTTTTTCCGCCAGAGACTGAAGAAATCAAATCAAGGCTAATCACCCGTCCTGATGACACTGAAGAAAAAGTTAAGTCCCGGCTAGAAATATACAAGCAAAATGCAGAAGCTATATCTTCCACATACTCAAGCATAACAAATAAGATTGACGGAAATCGCTCAAAAGAAGTAATTTTTGAAGAAATTGACTCTCTGTTATCACAAGTGCAGAATGACCAAGGGAAAATAATGATACCAGAAAAGTTTATACCTCATGTAAAGAAGGGGAAGGAATCATTAAGCCAGGATAAGTGGAGAGGAATTCCTACTAGGCTAAATAACATTCCCCACTCCAGAGAGATCAGGAAATATTTCTATGATGACGTACTGCAAGCCACAGAGAGGGCCATAGAAGATGGAAAATCTCGGTTGAAGGTGGACATCAACATTCCTGAGCTGAACCCGGAAATGGACGTTTATCGAATTGGTACTTTGATGGAACTCGTTCGAGCTCTTGCCCTTTCTTTTGCTGATGATGGGAAACGTGTTAAGGTTTGTGTGCAAGGGTCAATGGGAGAAGGTGCTCTTGCTGGAATGCCACTGCAGCTGGCTGGAACTCGAAAGATCTTAGAGTTTATGGATTGGGGCGATTATGGTGCAAAAGGGACCTTTATCAATATTGGGTCAATAGGTGCTGCAGAGGTTGATGAGCAAGATGACATGTACATCTTGGTAGCTCCTCAAAATGCTGTGGGGAATTGTATTATTGATGATCTAAGAGCAATGACCGATGCTGCTAAACACAGGCCAGTTATCCTAATCAACGCAAGGCTTAAGGATTTGCCGGGTTCCAGTGGTATAATGCAAACAATGGGACGGGAGAAAAGAATTGAGTATGCAGCATCATTTGAAAGTTGCTACTTCTTTCGGCTTCTCTATTATGCAGGAACTCAGTATCCCATAATGGGAGCTATCAGGATGTCTTATCCATTCCCTTACGAGCTTTACAAGAGGGTGGATGAATCATATGGAAAGGAGAAATATGTTCTCTTGTCAACATTCCCACAAAGGCCTACTACTGATGAAATTAATGACACCTTCCAAGGAAAACCAAGGACTGAAACTAGGAAAGCCTCTGGGATTTGGTTAGGGTTTCTTAAGTGGCATTCTTTGAACAGAATGAAAGTATATGGACAATTTCTAGTGGAAAGTAGAAGACACCATAGCTGA 1857 0.4308 MSLTSLSSLRSSTITPSLSFSLLSTTSSSLSSSDQCLSLPRLSLRTQPLRSPNLFHVTHLRINPKSKKGLKVNCSIKEPLKVMISGSPASGKGTQCELIVQKFGLVHISTGDLLRAEVAAGSEIGNKAKEYMNAGRLVPDEIVTAMVTARLSCEDAKQKGWLLDGYPRSFAQAEALEQQKIRPDVFIVLDVPDEILIDRCVGRRLDPVTGKIYHIKFFPPETEEIKSRLITRPDDTEEKVKSRLEIYKQNAEAISSTYSSITNKIDGNRSKEVIFEEIDSLLSQVQNDQGKIMIPEKFIPHVKKGKESLSQDKWRGIPTRLNNIPHSREIRKYFYDDVLQATERAIEDGKSRLKVDINIPELNPEMDVYRIGTLMELVRALALSFADDGKRVKVCVQGSMGEGALAGMPLQLAGTRKILEFMDWGDYGAKGTFINIGSIGAAEVDEQDDMYILVAPQNAVGNCIIDDLRAMTDAAKHRPVILINARLKDLPGSSGIMQTMGREKRIEYAASFESCYFFRLLYYAGTQYPIMGAIRMSYPFPYELYKRVDESYGKEKYVLLSTFPQRPTTDEINDTFQGKPRTETRKASGIWLGFLKWHSLNRMKVYGQFLVESRRHHS 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0851 618 FunFam Adenylate kinase, chloroplastic 76 287 - -
Lele19g0851 618 Gene3D - 75 294 IPR027417 -
Lele19g0851 618 ProSitePatterns Adenylate kinase signature. 161 172 IPR033690 -
Lele19g0851 618 PRINTS Adenylate kinase signature 83 96 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 PRINTS Adenylate kinase signature 161 177 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 PRINTS Adenylate kinase signature 232 247 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 PRINTS Adenylate kinase signature 111 125 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 PANTHER NUCLEOTIDE KINASE 70 280 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 80 284 IPR027417 -
Lele19g0851 618 Pfam Adenylate kinase 84 260 - -
Lele19g0851 618 CDD ADK 81 274 IPR000850 GO:0005524|GO:0006139|GO:0019205
Lele19g0851 618 Pfam Domain of unknown function (DUF1995) 331 573 IPR018962 -
Lele19g0851 618 TIGRFAM adk: adenylate kinase 81 282 IPR006259 GO:0004017|GO:0005524|GO:0016776
Lele19g0851 618 Hamap Adenylate kinase [adk]. 80 283 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0851 Lele-ChrLele19 5150462 5155644 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0704 17 18829644 18834013 Lele19g0851 19 5150462 5155644 hybridization
Lele18g0818 18 5126579 5131967 Lele19g0851 19 5150462 5155644 hybridization