Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0771 ATGTCAGGAGGCACTCAGAATAGTTTAAGAAAAGCTCTCGGAGCCCTGAAGGATACGACAACAGTTTCATTGGCTAAAGTCAACAGCGATTACAAGGAATTGGACATTGCTATAGTGAGAGCCACAAATCATGTGGAGCGTCCTTCGAAGGAGAAACATATAAGAGCGATTTTTTCTGCAATATCTGCTACTAGACCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGGCGATTGTCAAAGACACATAATTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCCACATTCCATGAGGAACTCATAAATTATGGCAGAAGCAGAAGTCACATGCTCAACATGTCTCATTTCAAAGATGATTCCAGTCCAAATGCATGGGATTATTCAGCATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGACTAGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTCCAAGGACTAAAGATTTGGACGCTGCAGAGTTGTTAGAGCAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAATAACTTTGTCATTGAGCTAGCACTCTCGATGGTCGCTTCAGAAAGCATTAAAATTTATCAAGCTATCAGTGATGGCACTATCAATCTGGTTGATAAGTTCTTTGAGATGACCCGCTCTGATGCTATGAGAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGGCTGAGAGACTGTCTGAGTTCTATGAAATATGTCGAAACCTTGATATTGGACGAGGAGAGAAATTTGTTAAAATTGAGCAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCCCGGGATTCAATAGTCCGCAAGGATCAGGCCATTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAAGACATCAGAGGCGCAGGAGGCACCTGCAGCTCCTGTACAGGAGTCACCTCCGCCTCCACCTCCTGAACCTGTAAAAGTGGAAGCACCTGCAGCACAACCCCCACCTGATTTGTTGAATTTGGACGATCCTGTTCCAGCTGCTTCAGAGTTGGAAGAGAAGAATGCCTTGGCATTAACCATTGTTCCTGTTGCTGATCAGCCAACTTCTGTTTCAAAACAAGAAAATGGAACTACTGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGTTTCTGCAGCTAGCAAACTGGCGGGAGGGTTAGACAAGCTTACACTAGACAGCCTATATGATGATGCAGTCAGGAGGAACAACCAGAACGTGAGCTATAATCCATGGGAACCAGCACCAATGGGAACCATGATGCAACCGACAATGCACGATCCATTTTTTGCTTCTAACGCAGTTGCTGCTCCACCTTCGGTCCAGATGGCTGCTATGTCCAACCAGCAGCAGGCTTTCATGTTTCAGCAGCAGCATCAGCAAATGATGATGATGGCCCCTCAGCAACCATCTGCTAATCCTTTTGGAAATCCTTATGGAGCCACCGTCCGCCCATATGGCTCAGGTATGCCTGTTCAAGCGTACAATCCATACACCGGTCGCATCTAG 1647 0.4548 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDAAELLEQLPALQELLFRVLCCQPEGAAVNNFVIELALSMVASESIKIYQAISDGTINLVDKFFEMTRSDAMRALDIYRRAGKQAERLSEFYEICRNLDIGRGEKFVKIEQPPASFLQAMEEYVKDAPRDSIVRKDQAIDNKIASPKEVLAIEYKTSEAQEAPAAPVQESPPPPPPEPVKVEAPAAQPPPDLLNLDDPVPAASELEEKNALALTIVPVADQPTSVSKQENGTTGWELALVTAPSSNESVSAASKLAGGLDKLTLDSLYDDAVRRNNQNVSYNPWEPAPMGTMMQPTMHDPFFASNAVAAPPSVQMAAMSNQQQAFMFQQQHQQMMMMAPQQPSANPFGNPYGATVRPYGSGMPVQAYNPYTGRI 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0771 548 SUPERFAMILY GAT-like domain 169 300 - -
Lele18g0771 548 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Lele18g0771 548 FunFam Clathrin assembly protein AP180 8 164 - -
Lele18g0771 548 FunFam putative clathrin assembly protein At5g35200 166 318 - -
Lele18g0771 548 Gene3D - 7 164 IPR008942 -
Lele18g0771 548 SMART enth_2 32 164 IPR013809 -
Lele18g0771 548 MobiDBLite consensus disorder prediction 340 364 - -
Lele18g0771 548 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Lele18g0771 548 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 499 IPR045192 GO:0048268|GO:0072583
Lele18g0771 548 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Lele18g0771 548 CDD ANTH_N 34 157 - -
Lele18g0771 548 MobiDBLite consensus disorder prediction 333 364 - -
Lele18g0771 548 Gene3D ANTH domain 165 314 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0771 Lele-ChrLele18 4805947 4810218 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0771 18 4805947 4810218 Lele19g0807 19 4847620 4851703 hybridization
Lele18g0771 18 4805947 4810218 Lele20g0649 20 13694849 13699128 hybridization