Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele20g0649 ATGTCAGGAGGCACGCAGAATAGTTTAAGAAAAGCTCTCGGAGCCCTGAAGGATACGACAACAGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTGAGAGCTACAAATCATGTGGAGCGTCCTTCGAAGGAGAAACATATAAGAGCTATTTTTTCTGCAATATCTGCTACTAGACCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGACGATTGTCGAAGACACATAACTGGGCGGTTGCATTAAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCCACATTCCATGAGGAACTCATAAGTTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTCAAAGATGATTCCAGTCCAAATGCATGGGATTATTCAGCATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGACTGGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTCCAAGGACTAAAGATTTGGACACTGCAGAGTTGTTGGAGCAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCTGAGGGAGCAGCTGTGAATAATTTTGTCATTCAGCTAGCACTCTCGATGGTCGCTTCAGAAAGCATTAAAATTTATCAAGCTATTAGTGATGGCACTGTCAATCTGGTTGATAAGTTTTTTGAGATGAACCGCTCTGATGCTATGAGAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGGCTGAGAGACTGTCTGAGTTCTATGAAATATGTCGAAATCTTGATATTGGACGAGGAGAGAAATTTGTTAAAATTGATAAGCCCCCTGCATCATTTCTACAAGCCATGGAAGAGTATGTCAAAGATGCTCCTCGGGATTCAATAGTACGCAAGGATCAGGCCATTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAAGACATCAGAGGCGCAGGAGGCACCTGCAGCTCCTGTGCAGGAGTCACCTCCGCCTCCACCTCCTGATCCTGTAAAAGTGGAAGCACCTGCAGCACAACCCCCACCTGATTTGTTGAATTTGGACGATCCTGTCCCAGCTGCTTCAGAGTTGGAGGAGAAGAATGCCTTGGCATTAGCCATTGTTCCTGTTGCTGATCAGCCAACTTCTGTTTCAAAACAAGAAAATGGAACTACTGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGTTTCTGCAGCTAGTAAACTGGCGGGAGGGTTAGACAAGCTTACACTAGACAGCCTATATGATGATGCAGTCAGGAGGAACAACAGGAACGTGAGCTATAATCCATGGGAACCAGCACCAATGGGAACCATGATGCAACCGGCAATGCACGATCCATTTTTCGCTTCTAACGCAGTTGCTGCTCCACCTTTGGTCCAGATGGCTGCTATGTCCAACCAGCAGCAGGCTTTCATGTTTCAGCAGCATCAGCATCAGCAAATGATGACGATGGCCCCTCAGCAACCATCTGCTAATCCTTTTGGAAATCCTTATGGAGCCACCGTCCACCCATATGGCTCAGGTATGCCTGTTCAAGCGTACAATCCATACCCTGGTCGCATCTAG 1650 0.4521 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPTFHEELISYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDRPRTKDLDTAELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVASESIKIYQAISDGTVNLVDKFFEMNRSDAMRALDIYRRAGKQAERLSEFYEICRNLDIGRGEKFVKIDKPPASFLQAMEEYVKDAPRDSIVRKDQAIDNKIASPKEVLAIEYKTSEAQEAPAAPVQESPPPPPPDPVKVEAPAAQPPPDLLNLDDPVPAASELEEKNALALAIVPVADQPTSVSKQENGTTGWELALVTAPSSNESVSAASKLAGGLDKLTLDSLYDDAVRRNNRNVSYNPWEPAPMGTMMQPAMHDPFFASNAVAAPPLVQMAAMSNQQQAFMFQQHQHQQMMTMAPQQPSANPFGNPYGATVHPYGSGMPVQAYNPYPGRI 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele20g0649 549 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Lele20g0649 549 SMART enth_2 32 164 IPR013809 -
Lele20g0649 549 MobiDBLite consensus disorder prediction 333 363 - -
Lele20g0649 549 SUPERFAMILY GAT-like domain 169 300 - -
Lele20g0649 549 FunFam putative clathrin assembly protein At5g35200 166 318 - -
Lele20g0649 549 FunFam Clathrin assembly protein AP180 8 164 - -
Lele20g0649 549 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Lele20g0649 549 CDD ANTH_N 34 157 - -
Lele20g0649 549 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Lele20g0649 549 Gene3D - 7 164 IPR008942 -
Lele20g0649 549 Gene3D ANTH domain 165 314 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele20g0649 549 MobiDBLite consensus disorder prediction 340 363 - -
Lele20g0649 549 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 499 IPR045192 GO:0048268|GO:0072583
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele20g0649 Lele-ChrLele20 13694849 13699128 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0756 17 19149428 19153535 Lele20g0649 20 13694849 13699128 hybridization
Lele18g0771 18 4805947 4810218 Lele20g0649 20 13694849 13699128 hybridization