Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0807 ATGTCAGGAGGCACGCAGAATAGTTTAAGAAAAGCTCTTGGAGCCCTGAAGGACACGACAACAGTTTCATTGGCTAAAGTCAACAGTGATTACAAGGAATTGGACATTGCTATAGTGAGAGCCACAAATCATGTGGAGCGTCCATCAAAGGAGAAACATATAAGAGCTATTTTTTCTGCAATCTCTGCTACTAGACCTCGGGCTGATGTTGCTTACTGCATCCATGCTCTTGCAAGACGATTGTCAAAGACACATAACTGGGCGGTTGCTTTAAAAACTTTAATTGTTATTCACCGTGCTCTAAGGGAAGTGGATCCCTCATTCCACGAGGAACTCATAAATTATGGCAGAAGCAGAAGTCATATGCTCAACATGTCTCATTTCAAAGATGATTCCAGTCCAAATGCATGGGATTATTCAGCATGGGTCCGCACTTATGCATTGTTTTTGGAGGAAAGATTGGAATGTTTTCGTGTATTGAAGTATGACATTGAGACAGATCGTTCAAGGACTAAAGATTTGGACACTGCAGAGTTGTTGGAGCAGTTGCCAGCATTACAGGAACTTCTGTTTCGAGTTCTTTGTTGTCAGCCAGAGGGAGCAGCTGTGAATAACTTTGTCATTCAGCTAGCACTCTCAATGGTCGTTTCAGAAAGCATTAAAATTTATCAAGCTATCAGTGATGGCACTATCAATCTGGTTGATAAGTTTTTTGAGATGAACCGCTCTGATGCTATCAGAGCTCTTGATATATACAGGAGGGCTGGGAAGCAGGCTGAGAGACTGTCTGAGTTTTATGAAATATGTCGAAATCTTGATATTGGACGAGGAGAGAAATTTGTTAAAATTGAGCAGCCCCCTGCATCGTTTCTACAAGCAATGGAAGAGTATGTCAAAGATGCTCCCCGGGACTCAATAGTCCGCAAGGATCAGGCGGTTGACAACAAAATTGCCTCTCCAAAAGAAGTTTTGGCTATAGAATACAACAAGACATCAGAGGCGCAGGAGGCACCTGCAGCACCTGTGCAGGAGTCACCTCCACCTCCTGAACCTGTAAAAGTGGAAGCACCTGCAGTACAACCACCACCTGATTTGTTGAATTTGGACGATCCTGTTCCAGCTGCTTCAGAGTTGGAAGAGAAGAATGCCTTGGCATTAGCCATTGTTCCTGTTGCTGATCAGCCAACATCTGTTTCAAAACAACAAAACGGAACTACAGGCTGGGAATTGGCACTTGTTACAGCTCCAAGTTCTAATGAGAGTGCTTCTGCAGCTAGCAAACTGGCGGGAGGGTTAGACAAGCTTACACTAGACAGCCTATATGATGATGCAGTTAGAAGGAACAACCAGAACGTGAGCTATAATCCATGGGAACCAACACCTATGGGAACCATGATGCAACCGACAATGCACGATCCATTTTTCGCTTCTAATGCAGTTGCCGCTCCACCTTCTGTCCAGATGGCTGCTATGTCCAACCAGCAGCAGGCTTTCATGTTTCAGCAGCAGCAAATGATGATGATGGCCCCTCAGCAACCATCCGCTAATCCTTTTGGAAATCCTTATGGAGCCACTGTCCACCCCTATGGCTCAGGTATGCCTGTTCAAGCGTACAATCCATACACCGGCCACATTTAG 1638 0.4481 MSGGTQNSLRKALGALKDTTTVSLAKVNSDYKELDIAIVRATNHVERPSKEKHIRAIFSAISATRPRADVAYCIHALARRLSKTHNWAVALKTLIVIHRALREVDPSFHEELINYGRSRSHMLNMSHFKDDSSPNAWDYSAWVRTYALFLEERLECFRVLKYDIETDRSRTKDLDTAELLEQLPALQELLFRVLCCQPEGAAVNNFVIQLALSMVVSESIKIYQAISDGTINLVDKFFEMNRSDAIRALDIYRRAGKQAERLSEFYEICRNLDIGRGEKFVKIEQPPASFLQAMEEYVKDAPRDSIVRKDQAVDNKIASPKEVLAIEYNKTSEAQEAPAAPVQESPPPPEPVKVEAPAVQPPPDLLNLDDPVPAASELEEKNALALAIVPVADQPTSVSKQQNGTTGWELALVTAPSSNESASAASKLAGGLDKLTLDSLYDDAVRRNNQNVSYNPWEPTPMGTMMQPTMHDPFFASNAVAAPPSVQMAAMSNQQQAFMFQQQQMMMMAPQQPSANPFGNPYGATVHPYGSGMPVQAYNPYTGHI 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0807 545 FunFam Clathrin assembly protein AP180 8 164 - -
Lele19g0807 545 Gene3D - 7 164 IPR008942 -
Lele19g0807 545 SUPERFAMILY ENTH/VHS domain 33 165 IPR008942 -
Lele19g0807 545 SUPERFAMILY GAT-like domain 169 300 - -
Lele19g0807 545 MobiDBLite consensus disorder prediction 333 358 - -
Lele19g0807 545 PANTHER CLATHRIN ASSEMBLY PROTEIN 9 501 IPR045192 GO:0048268|GO:0072583
Lele19g0807 545 Pfam ANTH domain 33 300 IPR011417 GO:0005543
Lele19g0807 545 MobiDBLite consensus disorder prediction 341 358 - -
Lele19g0807 545 FunFam putative clathrin assembly protein At5g35200 166 318 - -
Lele19g0807 545 CDD ANTH_N 34 157 - -
Lele19g0807 545 Gene3D ANTH domain 165 315 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lele19g0807 545 SMART enth_2 32 164 IPR013809 -
Lele19g0807 545 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0807 Lele-ChrLele19 4847620 4851703 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0756 17 19149428 19153535 Lele19g0807 19 4847620 4851703 hybridization
Lele18g0771 18 4805947 4810218 Lele19g0807 19 4847620 4851703 hybridization