Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0480 ATGGAATGGATAGAGAACATGTCTTGCAACGATTCACCATCACAAAACATTAATGCCAAGGATGGTTCTTTTGTCAAATGTTTTCTGCCAGAAAGCAACATTTCTTATAATACAAGATTCTTCAAATTAGATTGCAGTAATGGTGAGACATTCATCTCGGCAGATGAACTCAAAATAAATTTATGGAATCTTGAGGTGGGTGATCAGTGTTTCAATATCATCGACATGAAGCCGCCAAACATGGAGAATCTGACTGCAATATCTGACCATAGTGTCAGAATATTTCTCGATGGATCGCTCTTTCAGAGGAAATCAGTTTTTGAGGAACAGACTAAAAGCATCTCCGATGTAAAAGTTTTTGAGGATGGCCTTGGTGGGCAGCATCTCTTAAGTCGTGATTACATGTATATGAAGTTACCAGAGTTATTCAACAATGAACTCATATTCGATCAATTTGACTGCTGCTTTAGTGGAGATCGACTTCATTTTGCAACTGGTGATGGCAGAGATGACGTATTAGACTATGATACCATAACAGCGATTCAGTTCGAGAAGCGTGGTGATTATCTAGCCATTGGAGATCATGGAGGACGTGTTGTGATATTTGAAAAAGATGATAGAAAGATTGTGGGTTATACAGGCAACACTTTTCATGCAAAATGCCAGAAGGTGTATGCTCAATATCACAGCTCTAATATTAATTCAATTTCAAATAATAGTGATACTGAGACATTTATCTCAGCAGATGAATTTAGAATAAATTTATGGAATCTTGAGGTCAGTGATCGGAATTTCAATATCATCGACATGAAGCCATCGAACATGGAGGAACCTTATGAGATGATAACATCAGCTGAATTCCATCCAATACACTGCAACCTGCTAGCATATGGCAGCTCACAGGGTCTTATTCGTATATCAGACTTGAGACAAGCAGCAAGATGTGATTGTAGTGTTAGATTATTTCGTGATCGATCACTCTTCCGCATGAAATTCCCTTTTGAGGAAGTGGCTGCATGCATCTCTGATGTAAAATTTCTGGTTGATGGCATTGGTGGCCAACAGCTTATCAGTCGTGATTACATGAATATGAAGCTAGCGGAGTTATACAACAAGGACCGCATATTCGATCAATTCGACTGCTGCTGTAGTAGAGATGGACTGTGTTTTGCAACTGGTTCTTATGGGTCTGTTAATCGCTTGAAGATGTTCTCCATTGGGAAAGGAAGTGTGCAAGACATCAAACTAGATATAATTGGAAATTTTGAAAGTTCTAGGATACCTGCTCTACCTGGTGGGACGATTAGAAGGTCGCCTATACTAAGCAACATGCAAAGTGGGTTTGACTTTGACCAAGGTGATGGCATAGATGATGACTTAGATTGTGACTTGAGCTCCAAACTGTTGCATGTAGCTTGGCATCCAACATCCAATTTGGTGGCTGCTGCTTCTCGAAGTAGCTTGATATTGTATCATAAATGCCAAAAGGTGTATGCTCAAGATCACAGTGAATCTGAGACATTTATCCCAGCAGATGCACTTAGAATCAATTTATGGAATCTTGAGATTTGTCGATCAATCACTCTCCGGCGAGAAATTCACTTTTGTTCAAATGTCAGCAAGCTGGAGAATGTATACTTTGAGGAGCACATATTCGATCAATTTGACTGCTGCTGTAGTAGAGATGGACTAGTTTTGCAACTGTGGAAGTCTGGAAGACCTCAAACTGGATATAATCGGAAATCTTTACCGGTAATTGACTTTGCAGAGGTTGGTGCAAAGCTTCCATCCGCATGCGACATGAAGTGGTGGGCATGGCGGCCAGATTTTGCACAGATCGACTTTTGA 1848 0.401 MEWIENMSCNDSPSQNINAKDGSFVKCFLPESNISYNTRFFKLDCSNGETFISADELKINLWNLEVGDQCFNIIDMKPPNMENLTAISDHSVRIFLDGSLFQRKSVFEEQTKSISDVKVFEDGLGGQHLLSRDYMYMKLPELFNNELIFDQFDCCFSGDRLHFATGDGRDDVLDYDTITAIQFEKRGDYLAIGDHGGRVVIFEKDDRKIVGYTGNTFHAKCQKVYAQYHSSNINSISNNSDTETFISADEFRINLWNLEVSDRNFNIIDMKPSNMEEPYEMITSAEFHPIHCNLLAYGSSQGLIRISDLRQAARCDCSVRLFRDRSLFRMKFPFEEVAACISDVKFLVDGIGGQQLISRDYMNMKLAELYNKDRIFDQFDCCCSRDGLCFATGSYGSVNRLKMFSIGKGSVQDIKLDIIGNFESSRIPALPGGTIRRSPILSNMQSGFDFDQGDGIDDDLDCDLSSKLLHVAWHPTSNLVAAASRSSLILYHKCQKVYAQDHSESETFIPADALRINLWNLEICRSITLRREIHFCSNVSKLENVYFEEHIFDQFDCCCSRDGLVLQLWKSGRPQTGYNRKSLPVIDFAEVGAKLPSACDMKWWAWRPDFAQIDF 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0480 615 SMART WD40_4 457 493 IPR001680 GO:0005515
Lele18g0480 615 SMART WD40_4 272 308 IPR001680 GO:0005515
Lele18g0480 615 SMART WD40_4 218 257 IPR001680 GO:0005515
Lele18g0480 615 SMART WD40_4 168 203 IPR001680 GO:0005515
Lele18g0480 615 Gene3D - 153 569 IPR015943 GO:0005515
Lele18g0480 615 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 63 90 IPR000009 GO:0000159|GO:0019888
Lele18g0480 615 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 35 62 IPR000009 GO:0000159|GO:0019888
Lele18g0480 615 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 45 85 IPR000009 GO:0000159|GO:0019888
Lele18g0480 615 SUPERFAMILY WD40 repeat-like 153 490 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0480 Lele-ChrLele18 2820602 2831538 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0480 18 2820602 2831538 Lele19g0500 19 2863494 2875864 hybridization
Lele18g0480 18 2820602 2831538 Lele20g0956 20 15664349 15675405 hybridization