Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele19g0500 ATGGTACGACGGAAAACTATAAAGTTCTATGATATCATAACATCAATTGAGTTCGAGAAGCGTGGCGATTATCTTGCCATTGGAGATGAAGATGGACGCGTTCTAATATTTGAAGGAGATGATCGAAAGACGAATATTGAAGCTGTAGACTACACGCTTCATGCAAAATGTCGAAAGGTGTATGCTCATGCTCACAGCTTTAATATTAACTCCATCTCAAATAATAGTGATCAGTGTTTCAATATCATCGACATGAAGCCGGCAAACATGGAGAATCTTGCTGGTATAACTTTGTCATCCTCTGTTTCTTACAGTCCAGCTTGGTTATATAGATTTCTTGATGGATCACTCTTTCACATGAAATTATCAGTTCTAGAGGAACTGACAGCAAGCATCTCTGATGTAAAACTTTTTGATGATGGCATTGGGTGGCAGCATCTCATAAGTAGTGATTACATCAATATGAAGGGGCATTATTCAGAATTCAAGAGCACCTGCGCCCTAGAAACCGCTTGTTTCATGAAGCTACCCGATTTATTCAACAATGAACTCATATTCGATCAACTTCATTCTGCAACTGGTGCTCACAGAGATGGTGACTTAGACTACAGTTTAGATGATACTATAATAGCGATTCAGTTCGAGAAGTGTGGTGATCATCTCACAATTGGAGATCAAGGAGGACGTGTTGTGATATTTGAAAGAGATGAAAGAAAGATTTCTTGGGTCTCTCTCTGTGTAACTGACTTCGATGTTTTCTCTGCTATTCTCGTGGAGATTGATTACTACAATAATGTTAATGCTGAAACATTTATCGCAGCAGACGAATTTAGAATCAATTTATGGAATTTCAGTATCATCGACATGAAACCGTCGAACGTGGAGGAACCTTATGAGATGATAACATCAGCTGAATTTCATCCAGTACACTGCAAACTGCTAGCATATGGCAGCTCACGGGTTCGTATTCGTATATCTGACATGAGACAGGCAGCAAGATGTGACCGTAGTGTTAGATTATTTCGTGATCGATCACTCTTCCGCATGAAATTCCCTTTTGATGAAGTGGCTGCATGCATCTCTGATGTAAAACTTCTGGTTGATGGCATTGGTGGCCAACAGCTTATCAGTCGTGATTACATGAATATGAAGCTTTGGGACATGCGCATGGATTCTTGTACAGTTGCAACATTCAGGATTCATGAGCACCTGCGCCCGAAAGTATTCTCCTACAAAATTGACATTGCAGAGTATGATGATATCATCACAGCGATTCAGTTCGAAAAGCGTGGTGATTATCTAGCCATTGGAGATCAAGGAGGTCGTGTTGTGATTTTTGAAAGAGATTATCGAAAGATTGTACAGGCAAAACTTTTCATGCAAAATGCCAAAAGGTGTATGTTCATGCTCGCAGCTTTAATATCAAGTCAATTTCAAATAATAGAGATGATAGCATCAGCTGTATTCCATCCAGTACACTGCAACCTGCTAGCATATGGCAGCTCACACGGTCGTATTCGTGTATATGACTTGAGACAAGCAGCAAGATGTGGCCGTAGTGTTATATCATTTGATGATCGGTCAGTCTTCCCCATGAAATCCATTTTTGATCTGATGGCTTCAAGAATCTCTGATGTAAACTTTCTGGTTGATGGTGGCGTTGGGGGCCAGCAACTTATAAGTCGTGATTACTTGAATATGAAGCTTTGGGACATGCGCATGGATTCTCGTCCAGTTGAAACATTCAGAATTCAAGAGCACCTGCGCCATAGAGTAATAATGACACTGAAGGATTTATACTTTGAGGAGCATATATTCGATCAATTTGACTGCAGCTGTAGTAGAGATGGACTTAGTTTTGCAACTGGTTGTTACGGTAATCGCTTAAAGATATTCTCCACCGGCAATGGAAGTGTGGAAGACCTCAAACTGGATATAATTGGAGATCTTAACAGCTATAGGATATCTGTTCTACCTGAAGACACGGTTAGTAGGTCGCCCATAAAAAGTAACACAAAACCTGGGTTTGAGCAAGGTGGTGTCAGGAACGATGATGAGTTAGATTTAAAACTCAAGCAACATTTTCCTTCCAAAGCTCAAGTAATTTTCTGTATTACGCCAAAGAATATGGGCACAGCCAAGCGCCGGAATGTTCGTCGGGTTAGTGCAAAGCTTCCATCCGCATGCGACATGAAGTGGTGGGCATGGCGGCCATATTTTGCACAGATTGACTTCAAGTCTTGA 2244 0.4082 MVRRKTIKFYDIITSIEFEKRGDYLAIGDEDGRVLIFEGDDRKTNIEAVDYTLHAKCRKVYAHAHSFNINSISNNSDQCFNIIDMKPANMENLAGITLSSSVSYSPAWLYRFLDGSLFHMKLSVLEELTASISDVKLFDDGIGWQHLISSDYINMKGHYSEFKSTCALETACFMKLPDLFNNELIFDQLHSATGAHRDGDLDYSLDDTIIAIQFEKCGDHLTIGDQGGRVVIFERDERKISWVSLCVTDFDVFSAILVEIDYYNNVNAETFIAADEFRINLWNFSIIDMKPSNVEEPYEMITSAEFHPVHCKLLAYGSSRVRIRISDMRQAARCDRSVRLFRDRSLFRMKFPFDEVAACISDVKLLVDGIGGQQLISRDYMNMKLWDMRMDSCTVATFRIHEHLRPKVFSYKIDIAEYDDIITAIQFEKRGDYLAIGDQGGRVVIFERDYRKIVQAKLFMQNAKRCMFMLAALISSQFQIIEMIASAVFHPVHCNLLAYGSSHGRIRVYDLRQAARCGRSVISFDDRSVFPMKSIFDLMASRISDVNFLVDGGVGGQQLISRDYLNMKLWDMRMDSRPVETFRIQEHLRHRVIMTLKDLYFEEHIFDQFDCSCSRDGLSFATGCYGNRLKIFSTGNGSVEDLKLDIIGDLNSYRISVLPEDTVSRSPIKSNTKPGFEQGGVRNDDELDLKLKQHFPSKAQVIFCITPKNMGTAKRRNVRRVSAKLPSACDMKWWAWRPYFAQIDFKS 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele19g0500 747 Gene3D - 480 653 IPR015943 GO:0005515
Lele19g0500 747 SUPERFAMILY WD40 repeat-like 11 325 IPR036322 GO:0005515
Lele19g0500 747 SMART WD40_4 408 447 IPR001680 GO:0005515
Lele19g0500 747 SMART WD40_4 3 38 IPR001680 GO:0005515
Lele19g0500 747 SMART WD40_4 474 510 IPR001680 GO:0005515
Lele19g0500 747 SMART WD40_4 198 234 IPR001680 GO:0005515
Lele19g0500 747 SMART WD40_4 589 633 IPR001680 GO:0005515
Lele19g0500 747 Gene3D - 203 479 IPR015943 GO:0005515
Lele19g0500 747 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 419 450 IPR000009 GO:0000159|GO:0019888
Lele19g0500 747 SUPERFAMILY WD40 repeat-like 206 638 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele19g0500 Lele-ChrLele19 2863494 2875864 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g1058 17 21127488 21130281 Lele19g0500 19 2863494 2875864 hybridization
Lele18g0480 18 2820602 2831538 Lele19g0500 19 2863494 2875864 hybridization