Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele17g0954 ATGGCGTCGAGCATAGGTATCATGGACAGTGCTTACTTTGTCGGCCGGAATGAGATTTTGACTTGGATCAACAAAATACTTCAACTCAATCTCTCGCGCATTGAGGAGGCTGCATCTGGCGCTGTACAATGCCAGATGATGGACATGACATACCCAGGGGTTGTTCCAATGCATAAGGTGAATTTTGATGCGAAATCAGAGTATGATATGATCCAGAATTACAAAATTCTTCAGGAAGTATTCAACAAGCTGAAGATTGAGAAGTATATTGAAGTTAACAGGCTTGTTAAAGGCCGACCTTTGGACAATCTGGAATTTCTACAATGGCTGAAACGTTATTGTGACTCTGTTAATGGCGGCATTATGAATGAGAATTATAACCCTGTGGAGCGTAGGAGTAAGGGTGGAAAGACTCTTAAGAGTTCTTCGAAGAGCTCAAAATCATTACAAATGAACATTGTTAATAATTCTGTTTCAGGCAACACACTCGGTCCTGATAGAACCTCTGGTTGGCTTCTTGACATTTCTGATCTGAGATTGTTCTCCATTTTTATTTTTTTGTTTTACCATGTTCTATTTGTTATGACTTTCTCTATTTTTGATGTCTTTTTGACGATAGGGCCCAAGCAACACAGGTCAAGTGGTGCAGCAGGCGTGGTTAATTCTTCAGCAGATATTCAAGCTTTGTCCAAGGAGATAACTGATCTCAAACTCTCTGTGGATATCCTGGAAAAAGAAAGAGACTTTTACTATGCAAAACTAAGGGACATAGAAATTCTTTGTCAGACTCCACAACTGGAGAATGGACCTATGTCTATAGCAACCAAGAAGATTTTGTATGCTGCAGATGCAAAGGAGTCAGCGTTAGATGAAGCTCAGGATTACCTTAATCAAGTTTTGGAAGCTGCTCAATCTGAAGAAGAAGAAGAAGAAGAAAAAGCAGAAGCAGAAGTGGAAGCAGAAGTGGAAGCAGAAATTAAAGCTTGA 987 0.3992 MASSIGIMDSAYFVGRNEILTWINKILQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKSEYDMIQNYKILQEVFNKLKIEKYIEVNRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRSKGGKTLKSSSKSSKSLQMNIVNNSVSGNTLGPDRTSGWLLDISDLRLFSIFIFLFYHVLFVMTFSIFDVFLTIGPKQHRSSGAAGVVNSSADIQALSKEITDLKLSVDILEKERDFYYAKLRDIEILCQTPQLENGPMSIATKKILYAADAKESALDEAQDYLNQVLEAAQSEEEEEEEKAEAEVEAEVEAEIKA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele17g0954 328 Gene3D - 6 134 IPR036872 -
Lele17g0954 328 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Lele17g0954 328 SUPERFAMILY EB1 dimerisation domain-like 226 284 IPR036133 GO:0008017
Lele17g0954 328 MobiDBLite consensus disorder prediction 302 328 - -
Lele17g0954 328 Pfam EB1-like C-terminal motif 243 281 IPR004953 GO:0008017
Lele17g0954 328 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 218 309 IPR027328 GO:0008017
Lele17g0954 328 FunFam Microtubule-associated protein RP/EB family member 1B 224 299 - -
Lele17g0954 328 FunFam RP/EB family microtubule-associated protein 6 134 - -
Lele17g0954 328 Coils Coil 226 246 - -
Lele17g0954 328 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Lele17g0954 328 Coils Coil 289 326 - -
Lele17g0954 328 MobiDBLite consensus disorder prediction 303 319 - -
Lele17g0954 328 Gene3D - 218 290 - -
Lele17g0954 328 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Lele17g0954 328 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 218 288 IPR004953 GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele17g0954 Lele-ChrLele17 20534617 20537445 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele17g0954 17 20534617 20537445 Lele19g0604 19 3475681 3478221 hybridization
Lele17g0954 17 20534617 20537445 Lele20g0844 20 15099961 15102645 hybridization