Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1814 ATGTCTTTATATTGTTCAAGCTCCGGAACAATAATCCCACGTACCCTCGTGGGAAAACGAAGAAGAAATAGCGGCTTCTCTCATGTAGAAGTACCCTGCTCCTTCTCCTTCCACTATAAATTACCCCATAACTTGTCAAACCACATTGGGTTTGCATCGAAATTCGACCACACTTCTTCTCCTTCTTCTTCTACTTCTTTTTCTATGATGGAGGAGGACCGTAAAAACCTCGGTCTTGTGTCCGACGCAGAGGAATATTCGGAGGAATTGGATGTTGCTGTCAGAGCGGTTCAAATGGCTTGCTCCCTCTGCCAGAAAATGCAGGAAAATTTGATCGTTAAGTCCAAGAGTGATAGTCAGGTCCATTCCAAGGACGACAATTCTCCAGTCACTGTTGCAGATTGGAGTGTGCAAGCAGTTGTCAGCTGGATATTGTCTGAGTGCTTAGGAGGTAACAATATCTCAATTCTTGCTGAAGAAGATGTTGAAACTCTCTCCAAGACTGGTTCATCTGAACTATTGGAAGCTGTGGTTAAGACTGTAAATGAATGTCTAGCTGAGGCGCCTCAATTCGGAGTTGAAGCCCCAAAATCAGCTCTTAGTGCTTCCGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCTACCGGAAGATTCTGGGCGCTTGACCCTGTTGATGGCACACTGGGGTTTGTACGTGGAGATCAATATGCTATAGCTCTTGCACTCATAGAGGATGGAGAATTAATGCTTGGAGTTCTTGGCTGTCCTAACTACCCAATGAGAAAGGAATGGTTAACCTATCATCATCGGTATCATAGGATCATATCTAAGTTGACTCCTCCAACATCTGAAACCTGGGACAAAGGTTGTGTGCTGTATGCTAGAAAGGGAAGTGGCAGGGCTTGGATGCAACCGCTGGTCCAGTTCAACAAGAAGTTTATGTGGCCAAATCACGCAAGACAAGTTTCAGTTTCTTCCATCGACAATCCGGCGTTGGCAACTTTCTGTGAACCTGTTGAGAAGGCAAATTCAAGCCACTCTTTCACTGAAGGACTGGCCCATTGTGTTGGTCTCAGGAAGCAGCCACTGAGAGTGTACAGCATGGTAAAATATGCAGCGATAGCTCGTGGTGATGCTGAGGTTTTCATGAAGTTTCCAAGGTGTGGTTATAAGGAGAAGATATGGGATCATGCCGCCGGTGTTGTCATCATAAAAGAGGCGGGTGGTGTGGTGACAGACGCCGGAGGCCGTCCACTAGACTTCTCAAAAGGCGCATATTTAGAAGGTCTCGATAGGGGAATAGTTGCTTGTGCTGGAGCCTCACTACATGAAAAGATCATAGATGCTGTTTATGCTAGCTGGAATTCTTCTTGCCTTTGA 1392 0.4598 MSLYCSSSGTIIPRTLVGKRRRNSGFSHVEVPCSFSFHYKLPHNLSNHIGFASKFDHTSSPSSSTSFSMMEEDRKNLGLVSDAEEYSEELDVAVRAVQMACSLCQKMQENLIVKSKSDSQVHSKDDNSPVTVADWSVQAVVSWILSECLGGNNISILAEEDVETLSKTGSSELLEAVVKTVNECLAEAPQFGVEAPKSALSASEVLEIISRCNSVGGPTGRFWALDPVDGTLGFVRGDQYAIALALIEDGELMLGVLGCPNYPMRKEWLTYHHRYHRIISKLTPPTSETWDKGCVLYARKGSGRAWMQPLVQFNKKFMWPNHARQVSVSSIDNPALATFCEPVEKANSSHSFTEGLAHCVGLRKQPLRVYSMVKYAAIARGDAEVFMKFPRCGYKEKIWDHAAGVVIIKEAGGVVTDAGGRPLDFSKGAYLEGLDRGIVACAGASLHEKIIDAVYASWNSSCL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1814 463 Gene3D - 84 317 - -
Lele16g1814 463 FunFam PAP-specific phosphatase HAL2-like 84 316 - -
Lele16g1814 463 CDD PAP_phosphatase 89 456 - -
Lele16g1814 463 ProSitePatterns Inositol monophosphatase family signature 1. 223 236 IPR020583 -
Lele16g1814 463 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 86 461 IPR006239 GO:0006790|GO:0008441
Lele16g1814 463 SUPERFAMILY Carbohydrate phosphatase 86 458 - -
Lele16g1814 463 Gene3D - 327 457 - -
Lele16g1814 463 PANTHER PHOSPHATASE 75 461 - -
Lele16g1814 463 Pfam Inositol monophosphatase family 126 458 IPR000760 GO:0046855
Lele16g1814 463 FunFam PAP-specific phosphatase HAL2-like 327 460 - -
Lele16g1814 463 ProSitePatterns Inositol monophosphatase family signature 2. 399 413 IPR020550 GO:0046854
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1814 Lele-ChrLele16 10745761 10748295 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0707 13 19100694 19103141 Lele16g1814 16 10745761 10748295 CCT
Lele14g0604 14 17509750 17512931 Lele16g1814 16 10745761 10748295 CCT
Lele15g1775 15 10711793 10714293 Lele16g1814 16 10745761 10748295 CCT
Lele16g1807 16 10678528 10681385 Lele16g1814 16 10745761 10748295 CCT
Lele16g1814 16 10745761 10748295 Lele16g1814 16 10745761 10748295 ECH
Lele13g0700 13 19036048 19038501 Lele16g1814 16 10745761 10748295 hybridization
Lele14g0597 14 17449476 17452006 Lele16g1814 16 10745761 10748295 hybridization