Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0597 ATGTCTTTATATTGTTCAAGCTCCGGAACAATAATCCCACGTACCCTCGTGGGAAAACGAAGAAGAAATAGCGGCTTCTCTCATTTAGAAGTACCCAGCTCCTTCTCCTTCCATTATAAATTACCCCATAACTTGTCAAGCCACATTGGGTTTGCATCGAAATTCGACCACACTTGTTCTTGTTCTTCTACTTCTTTTTCTATGATGGAGGAGGACCGTAAAAACCTGGGTGTTGTGTCCAAAGCAGAGGAATATTCGGAGGAATTGGATGTTGCTGTCAGAGCGGTTCAAATGGCTTGCTCCCTCTGCCAGAAAATGCAGGAAAATTTGATCGGTAAGTCCAAGAGTGATAGTCAGGTTCATTCCAAGGACGACAATTCTCCAGTCACTGTTGCAGATTGGAGTGTGCAAGCAGTTGTCAGCTGGATATTGTCTGAGTGCTTAGGAGGTAAAAATATCTCAATTCTTGCTGAAGAAGATGTCGAAACTCTCTCCAAGACTAGTTCATCTGAACTATTGGAAGCTGTGGTTAAGACTGTAAATGAATGTCTAGCTGAGGCGCCTCAATTCGGAGTTGAAGCCCCAAAATCAGCTCTTAGTGCTTCTGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCTACCGGAAGATTCTGGGCGCTTGATCCTGTTGATGGCACACTGGGGTTTGTACGTGGAGATCAATATGCTATAGCTCTTGCACTCATAGATGATGGAGAATTAATGCTTGGAGTTCTTGGCTGTCCTAACTACCCAATGAGAAAGGAATGGTTAACCTATCATCATCGGTATCATAGGATCATATCTAAGTTGACTCCTCCAACATCTGAAACCTGGGACAAAGGTTGTGTGCTGTATGCTAGAAAGGGAAGTGGCAGGGCTTGGATGCAACCGCTGGTCCTCAACAAGAAGTTTGTGTGGCCAAATCACGCAAGACAAGTTTCAGTTTCTTCCATCGACAATCCGGCGTTGGCAACTTTCTGTGAACCTGTTGAGAAGGCAAATTCAAGCCACTCTTTCACTGAAGGACTGGCCCATAGTGTTGGTCTCAGGAAGCAGCCACTGAGAGTGTACAGCATGGTAAAATATGCAGCGATAGCTCGTGGTGATGCTGAGGTTTTCATGAAGTTTCCAAGGTGTGGTTATAAGGAGAAGATATGGGATCATGCCGCCGGTGTTGTCATCATACAAGAGGCGGGTGGTGTGGTAACAGACGCCGGAGGCCGTCCACTGGACTTCTCAAAAGGCGCATATTTAGAAGGTCTCGATCGGGGAATAGTTGCTTGTGCTGGAGCCTCACTACATGAAAAGATCATAGATGCTGTTTATGCTAGCTGGAATTCTTCTTGCCTTTGA 1386 0.4567 MSLYCSSSGTIIPRTLVGKRRRNSGFSHLEVPSSFSFHYKLPHNLSSHIGFASKFDHTCSCSSTSFSMMEEDRKNLGVVSKAEEYSEELDVAVRAVQMACSLCQKMQENLIGKSKSDSQVHSKDDNSPVTVADWSVQAVVSWILSECLGGKNISILAEEDVETLSKTSSSELLEAVVKTVNECLAEAPQFGVEAPKSALSASEVLEIISRCNSVGGPTGRFWALDPVDGTLGFVRGDQYAIALALIDDGELMLGVLGCPNYPMRKEWLTYHHRYHRIISKLTPPTSETWDKGCVLYARKGSGRAWMQPLVLNKKFVWPNHARQVSVSSIDNPALATFCEPVEKANSSHSFTEGLAHSVGLRKQPLRVYSMVKYAAIARGDAEVFMKFPRCGYKEKIWDHAAGVVIIQEAGGVVTDAGGRPLDFSKGAYLEGLDRGIVACAGASLHEKIIDAVYASWNSSCL 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0597 461 Gene3D - 83 316 - -
Lele14g0597 461 SUPERFAMILY Carbohydrate phosphatase 85 456 - -
Lele14g0597 461 PANTHER PHOSPHATASE 73 459 - -
Lele14g0597 461 ProSitePatterns Inositol monophosphatase family signature 2. 397 411 IPR020550 GO:0046854
Lele14g0597 461 FunFam PAP-specific phosphatase HAL2-like 325 458 - -
Lele14g0597 461 ProSitePatterns Inositol monophosphatase family signature 1. 222 235 IPR020583 -
Lele14g0597 461 CDD PAP_phosphatase 88 454 - -
Lele14g0597 461 FunFam PAP-specific phosphatase HAL2-like 83 315 - -
Lele14g0597 461 Pfam Inositol monophosphatase family 125 456 IPR000760 GO:0046855
Lele14g0597 461 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 85 459 IPR006239 GO:0006790|GO:0008441
Lele14g0597 461 Gene3D - 325 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0597 Lele-ChrLele14 17449476 17452006 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0707 13 19100694 19103141 Lele14g0597 14 17449476 17452006 CCT
Lele14g0604 14 17509750 17512931 Lele14g0597 14 17449476 17452006 CCT
Lele15g1775 15 10711793 10714293 Lele14g0597 14 17449476 17452006 CCT
Lele16g1807 16 10678528 10681385 Lele14g0597 14 17449476 17452006 CCT
Lele14g0597 14 17449476 17452006 Lele14g0597 14 17449476 17452006 ECH
Lele14g0597 14 17449476 17452006 Lele15g1782 15 10786055 10788427 hybridization
Lele14g0597 14 17449476 17452006 Lele16g1814 16 10745761 10748295 hybridization