Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0700 ATGTTTTTATATTGTTCAAGCTCTGGACCAATAATCTCACGTACCCTCGTGGGAAAAGGCAGAAGAAATAGCGGCTTCTCTCATGTAGAAGCATCAATCTCCTCGTCCTCTTCCTCCTTCTCCTTCCATTATAAATTGCCCCATAACTTGTCAAGGCACATTGGGTCTGTATCGAAATTCGACCACACTTGTTCTTCTTCTTCCTCCTCCTCCTCTTCTTCTTCTATGATGGAGGAGAACAGTAAAAACCAGGGTGTTGTGTCCGAAGCAGAGGAATATTCCAAGGAATTGGATGTTGCTGTCAGAGCGGTTCAGATGGCTTGCTCCCTCTGCCAGAAAGTGCAGGAAAATTTGATTGTCAAGTCCAATAGTGACAGTCAGGTTCGTTCCAAGGACGATAATTCTCCGGTCACTGTTGCTGATTGGAGTGTCCAAGCAATTGTCAGCTGGATGTTGTCTGAGTGCTTAGGAAGCAAAAATATCTCAATTCTTGCTGAAGAAGATGTTGAAACTCTCTCCAAGACTAGTTCATCTGAACTATTGGAAGCTGTGGTTAAGACTGTGAATGAATATCTAGCTGAGGCGCCTCAATTCGGAGTTGAAGCCCCAAAATCAGCTCTTGATGCCTCTGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCTACTGGAAGATTCTGGGCGCTTGATCCCGTTGATGGCACGCTGGGTTTTGTACGTGGAGATCAATATGCTATAGCTCTTGCACTGATAGAGGATGGAGAAGTAATGCTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAGAAAGGAATGGTTGACCTATCATCATTGGTATCATAGGATTATATCTAAGTTGACTCCTCCAACATCTGAATCTTGGGACAAAGGTTGTGTGCTGTATGCTAGAAAGGGAAGTGGCAGGGCTTGGATGCAACCACTGGTCCAGTTCAACAAGAAGTTTGTATGGCCAAATCAAGCGAGACAAGTTTCAGTTTCTTCCATCGACAATCCGGCTGTGGCAACTTTTTGTGAACCTGTTGAGAAGGCAAATTCAAGCCACTCTTTCACGGAAGGACTGGCCCATAGTGTTGGTCTCAGGAAGCAGCCACTGAGAGTGTACAACATGGTGAAATATGCAGCGATAGCTCGTGGTGATGCCGAGGTTTTCATGAAGTTTCCAAGGTGTGGTTATAAGGAGAAGATATGGGATCACGCCGCCGGTGTTGTCATCATACAAGAGGCGGGGGGCGTGGTGACAGATGTGGGAGGCCGTCCACTAGACTTCTGA 1299 0.4619 MFLYCSSSGPIISRTLVGKGRRNSGFSHVEASISSSSSSFSFHYKLPHNLSRHIGSVSKFDHTCSSSSSSSSSSSMMEENSKNQGVVSEAEEYSKELDVAVRAVQMACSLCQKVQENLIVKSNSDSQVRSKDDNSPVTVADWSVQAIVSWMLSECLGSKNISILAEEDVETLSKTSSSELLEAVVKTVNEYLAEAPQFGVEAPKSALDASEVLEIISRCNSVGGPTGRFWALDPVDGTLGFVRGDQYAIALALIEDGEVMLGVLGCPNYPMRKEWLTYHHWYHRIISKLTPPTSESWDKGCVLYARKGSGRAWMQPLVQFNKKFVWPNQARQVSVSSIDNPAVATFCEPVEKANSSHSFTEGLAHSVGLRKQPLRVYNMVKYAAIARGDAEVFMKFPRCGYKEKIWDHAAGVVIIQEAGGVVTDVGGRPLDF 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0700 432 ProSitePatterns Inositol monophosphatase family signature 2. 406 420 IPR020550 GO:0046854
Lele13g0700 432 MobiDBLite consensus disorder prediction 68 88 - -
Lele13g0700 432 CDD PAP_phosphatase 96 432 - -
Lele13g0700 432 SUPERFAMILY Carbohydrate phosphatase 93 432 - -
Lele13g0700 432 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 93 432 IPR006239 GO:0006790|GO:0008441
Lele13g0700 432 ProSitePatterns Inositol monophosphatase family signature 1. 230 243 IPR020583 -
Lele13g0700 432 Gene3D - 334 432 - -
Lele13g0700 432 PRINTS Inositol monophosphatase superfamily signature 230 246 IPR000760 GO:0046855
Lele13g0700 432 PRINTS Inositol monophosphatase superfamily signature 403 427 IPR000760 GO:0046855
Lele13g0700 432 Gene3D - 91 324 - -
Lele13g0700 432 FunFam PAP-specific phosphatase HAL2-like 91 323 - -
Lele13g0700 432 Pfam Inositol monophosphatase family 133 431 IPR000760 GO:0046855
Lele13g0700 432 PANTHER PHOSPHATASE 78 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0700 Lele-ChrLele13 19036048 19038501 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0707 13 19100694 19103141 Lele13g0700 13 19036048 19038501 CCT
Lele14g0604 14 17509750 17512931 Lele13g0700 13 19036048 19038501 CCT
Lele15g1775 15 10711793 10714293 Lele13g0700 13 19036048 19038501 CCT
Lele16g1807 16 10678528 10681385 Lele13g0700 13 19036048 19038501 CCT
Lele13g0700 13 19036048 19038501 Lele13g0700 13 19036048 19038501 ECH
Lele13g0700 13 19036048 19038501 Lele15g1782 15 10786055 10788427 hybridization
Lele13g0700 13 19036048 19038501 Lele16g1814 16 10745761 10748295 hybridization