Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0917 ATGGGTTGGACTTTGCTTTTCTGGCTTCTAATCTGCTTCCCTCTCAACATTGCCCTCCTCGCCTCTACTTTCTACCAGGTTTTGATCTTAACGGACTTGGAAGCTGATTACATCAACCCATATGATGCTTCATCTCGGATCAATTACTTCGTCCTTCCTGAGTTTATTGGGCAGGGGCTACTGTCCGCTCTCTTCCTCTTCACAGGGCACTGGTTCATGTTTTTGTTGACCGTTCCCCTTACTTTCTATCATGGGATGCTGTATGTGAAGCGGCAGCATCTCCTTGATGTCACTGAAGTGTTTAGGGTACTTAATGCTGAGAAGAAATATCGGATTTTTAAGCTTGCCTTCTACTTATGTCTCCTTCTCATCACTGTATTCAGGCTTACGTTATTTATTGTGTACTACTTAGATCTCGATGATGACTGA 429 0.4359 MGWTLLFWLLICFPLNIALLASTFYQVLILTDLEADYINPYDASSRINYFVLPEFIGQGLLSALFLFTGHWFMFLLTVPLTFYHGMLYVKRQHLLDVTEVFRVLNAEKKYRIFKLAFYLCLLLITVFRLTLFIVYYLDLDDD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0917 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Lele16g0917 142 PANTHER CORNICHON-RELATED 7 134 - -
Lele16g0917 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0917 Lele-ChrLele16 5179266 5181461 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0900 05 5554427 5555387 Lele16g0917 16 5179266 5181461 CCT
Lele13g1529 13 24525653 24530521 Lele16g0917 16 5179266 5181461 hybridization
Lele14g1448 14 22881897 22885415 Lele16g0917 16 5179266 5181461 hybridization