Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0900 ATGGATCGGGATTTGTTTTTCTGGCTTATAATCTGTTTCCCCCTCAACATTGCTCTTGCTGCGTCCACTTTTTATCAGATTCTGATCTTAACAGACTTGGAGGCTGACTATGTCAACCCATACGAGGCTTCTTCCCGGATCAATTACTTCGTTGTTCCTGAGTTTATTGGGCAGGCAGCACTCTGCGCTCTCTTCCTCATCACTGGGCACTGGTTCATGATCTTATTGACTGTTCCTGTCACTGGCTATCACATGATGCTGTATGTGAAACAGCAGCATCTTCTTGATGTCACTGAAATGTTTAGGGCAGTTAAATCTGAGAAGAAATACCGCATAGTCAAGTCTGCTTTATACCTTTTGACTCTTGCTATTGTTGTCTTCAGGATTATCTCTGCTGGAATAATACTATTTCACAATTCCAAGTTTGAGGATGTCCGGTCTTCACTTTTTGAGTTCTAG 459 0.4227 MDRDLFFWLIICFPLNIALAASTFYQILILTDLEADYVNPYEASSRINYFVVPEFIGQAALCALFLITGHWFMILLTVPVTGYHMMLYVKQQHLLDVTEMFRAVKSEKKYRIVKSALYLLTLAIVVFRIISAGIILFHNSKFEDVRSSLFEF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0900 152 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Lele05g0900 152 PANTHER CORNICHON-RELATED 4 127 - -
Lele05g0900 152 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0900 Lele-ChrLele05 5554427 5555387 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0900 05 5554427 5555387 Lele13g1529 13 24525653 24530521 CCT
Lele05g0900 05 5554427 5555387 Lele14g1448 14 22881897 22885415 CCT
Lele05g0900 05 5554427 5555387 Lele15g0898 15 5212788 5213744 CCT
Lele05g0900 05 5554427 5555387 Lele16g0917 16 5179266 5181461 CCT
Lele05g0900 05 5554427 5555387 Lele05g0900 05 5554427 5555387 ECH