Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1529 ATGATTGTAATGCAGATCTGGAATCTTCCTACCTCCTCTGCATCCAGCTGCATCAAGGACAACAGCCACTTGCGACGATTTGTCTTCGATTTCAAGTTCTTGGCTTCCATAGATCTGAAACATCCTCATGTTCTTCTTCGACGTTTGCAAGGTCTCCTTCCACTTTTTATTAGAAACCCTACTTGCCCGGTACCGCCTGTTTTCTGTTCTTCTCCCTCTTATTTCATGGGCTGGACTTTGCTTTTCTGGCTTCTAATCTGTTTCCCTCTCAACATTGCCCTCCTCGCCTCTACTTTCTACCAGGTTTTGATCTTAACGGACTTGGAAGCTGATTACGTCAACCCATATGATGCTTCATCTCGGATCAATTACTTCGTCCTTCCTGAGTTTATTGGGCAGGGGCTACTGTGCGCTCTCTTTCTCTTCACAGGGCACTGGTTCATGTTTTTGTTGACCGTTCCCCTTACTTGCTATCATGTGATGCTGTATGTGAAGCAGCAGCATCTCCTTGATGTCACTGAAGTGTTTAGGGTGCTTAATGCTGAGAAGAAATATCGGATTTATAAGCTTACCTTCTATTTATCTCTCCTTCTCATCACTGTATTCAGGTTTGTCATGTTCTTAAAATAG 630 0.4365 MIVMQIWNLPTSSASSCIKDNSHLRRFVFDFKFLASIDLKHPHVLLRRLQGLLPLFIRNPTCPVPPVFCSSPSYFMGWTLLFWLLICFPLNIALLASTFYQVLILTDLEADYVNPYDASSRINYFVLPEFIGQGLLCALFLFTGHWFMFLLTVPLTCYHVMLYVKQQHLLDVTEVFRVLNAEKKYRIYKLTFYLSLLLITVFRFVMFLK 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1529 209 PANTHER CORNICHON-RELATED 82 201 - -
Lele13g1529 209 Pfam Cornichon protein 82 202 IPR003377 GO:0016192
Lele13g1529 209 SMART Cornichon_2 81 202 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1529 Lele-ChrLele13 24525653 24530521 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0900 05 5554427 5555387 Lele13g1529 13 24525653 24530521 CCT
Lele13g1529 13 24525653 24530521 Lele15g0898 15 5212788 5213744 hybridization
Lele13g1529 13 24525653 24530521 Lele16g0917 16 5179266 5181461 hybridization