Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0048 ATGGATTTGGTTTCGGAAACAACGGAGCCGGTGATCAGCAACCCCAACACCCCGTCGTCGGCACCAACAACTCCCAGCCGTTACGAGAACCAAAAGCGTCGTGACTGGAACACTTTCTGCCAATACCTCAGGAACCACCGTCCCCCGCTGTCTCTGTCCATGTGTAGCGGCGCTCACGTGCTGGAATTCCTTCGCTACCTGGATCAGTTTGGCAAGACTAAGGTTCACAACCCGAGCTGCCCCTTCTTTGGTATCCCCAACCCTCCGGCTCCTTGCCCTTGCCCTCTACGCCAGGCCTGGGGTAGCCTCGACGCCCTCATTGGCCGCCTCCGTGCCGCTTACGAGGAGCACGGTGGCGCTCCGGAGTCCAACCCCTTCGGCGCTCGAGCCGTCAGACTTTACTTGCGCGAGGTTCGTGACTTCCAGGCCAAGGCTAGGGGAGTCAGCTACGAGAAGAAGAGGAAGAGACCCAAGCCCAAGATGCTGCCTTCCCCAAATAACACTAATGCTACTACAGCTACTCCTTTTTAG 531 0.58 MDLVSETTEPVISNPNTPSSAPTTPSRYENQKRRDWNTFCQYLRNHRPPLSLSMCSGAHVLEFLRYLDQFGKTKVHNPSCPFFGIPNPPAPCPCPLRQAWGSLDALIGRLRAAYEEHGGAPESNPFGARAVRLYLREVRDFQAKARGVSYEKKRKRPKPKMLPSPNNTNATTATPF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0048 176 MobiDBLite consensus disorder prediction 1 30 - -
Lele16g0048 176 PANTHER PROTEIN G1-LIKE2 17 162 IPR040222 -
Lele16g0048 176 MobiDBLite consensus disorder prediction 146 176 - -
Lele16g0048 176 MobiDBLite consensus disorder prediction 162 176 - -
Lele16g0048 176 Pfam ALOG domain 19 140 IPR006936 -
Lele16g0048 176 MobiDBLite consensus disorder prediction 1 27 - -
Lele16g0048 176 ProSiteProfiles ALOG domain profile. 27 154 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0048 Lele-ChrLele16 319747 320277 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1370 05 8626707 8627888 Lele16g0048 16 319747 320277 ECH
Lele06g1232 06 7798419 7800275 Lele16g0048 16 319747 320277 ECH
Lele07g1433 07 8692199 8693379 Lele16g0048 16 319747 320277 ECH
Lele08g1227 08 7762759 7763538 Lele16g0048 16 319747 320277 ECH
Lele16g0048 16 319747 320277 Lele16g0048 16 319747 320277 ECH
Lele14g2303 14 27734899 27735429 Lele16g0048 16 319747 320277 hybridization