Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g1370 | ATGGATTCAATTCAAGAATTTATGGACACGTGTAACTCCGACAACCCCGGCAGTCTTACCCACGCCACCGCCTCTACCACCACCGGCGGCAGCGGCTTCGCCGCCAGCTCCTCCTCTTCTGCGTCCCCCACCACCACCAGTAGCCGCTACGAGAACCAGAAGCGTCGTGACTGGAACACCTTCGGTCAATACCTCAAGAACCACCGACCCCCTCTGTCCCTCTCCAGGTGTAGCGGTGCCCACGTTCTTGAATTCCTTCGGTACCTAGATCAATTCGGAAAGACCAAAGTTCATACTCCGATCTGCCCCTTTTACGGCGACCCGAACCCTCCGGCGCCGTGTCCGTGCCCTCTCCGACAGGCATGGGGTAGCCTCGACGCACTCATCGGTCGCCTGAGAGCAGCTTTTGAAGAGAACGGAGGGAAGCCAGAAGCCAACCCTTTTGGAGCTCGAGCCGTGAGACTGTACCTTCGTGAGGTTCGTGATCTGCAGTCGAAAGCAAGAGGGATTAGCTATGAGAAGAAGAAGAGGAAGCGACCACCACCTCCGCTGCCACCGCCACCACAACAACGACCTCCAATGCCTCTCCAGCTACCTCATCATCTTCATCATCACCATCATCTCCCACCTCCAGGGCTTTTAGAGTCATGCTCTCAAAAGAAGCAAAAGGTTAAAGATCATCTCTGGGATATCATGAATCTGCTTTTGATGCAAAACGCTGTGGGACTCATTATTAACACACTGCTAGTGGAGTACTGA | 759 | 0.5441 | MDSIQEFMDTCNSDNPGSLTHATASTTTGGSGFAASSSSSASPTTTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGDPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPPLPPPPQQRPPMPLQLPHHLHHHHHLPPPGLLESCSQKKQKVKDHLWDIMNLLLMQNAVGLIINTLLVEY | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g1370 | 252 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Lele05g1370 | 252 | PANTHER | PROTEIN G1-LIKE2 | 34 | 189 | IPR040222 | - | |
| Lele05g1370 | 252 | MobiDBLite | consensus disorder prediction | 167 | 215 | - | - | |
| Lele05g1370 | 252 | MobiDBLite | consensus disorder prediction | 1 | 49 | - | - | |
| Lele05g1370 | 252 | ProSiteProfiles | ALOG domain profile. | 49 | 176 | IPR006936 | - | |
| Lele05g1370 | 252 | Pfam | ALOG domain | 37 | 162 | IPR006936 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele05g1370 | Lele-ChrLele05 | 8626707 | 8627888 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele14g2303 | 14 | 27734899 | 27735429 | ECH | |
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele16g0048 | 16 | 319747 | 320277 | ECH | |
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele05g1370 | 05 | 8626707 | 8627888 | ECH | |
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele06g1232 | 06 | 7798419 | 7800275 | ECH | |
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele07g1433 | 07 | 8692199 | 8693379 | hybridization | |
| Lele05g1370 | 05 | 8626707 | 8627888 | Lele08g1227 | 08 | 7762759 | 7763538 | hybridization |