Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1227 ATGGATTCAATTCAAGAATTTATGGACACGTGTAACTCCGACAACACCGGCAGTCTTGCCCACACCACCATCGCAGGGGGCGGCGGCTTAGCAGCCAGCTCCTCCTCTTCGGCTTCCCCCGCCACCACCAGCAGCCGCTACGAGAACCAGAAGCGTCGTGACTGGAACACCTTCGGTCAGTACCTCAAGAACCACCGACCCCCTCTGTCCCTCTCCAGGTGTAGCGGTGCTCACGTTCTTGAATTCCTTCGGTACCTAGATCAATTTGGAAAGACCAAAGTGCATACTCCGATCTGCCCCTTTTACGGCCACCCGAACCCCCCAGCGCCGTGTCCTTGCCCTCTCCGACAGGCATGGGGTAGCCTCGACGCGCTCATCGGTCGCCTGAGAGCAGCTTTTGAAGAGAACGGAGGGAAGCCAGAAGCCAACCCTTTTGGAGCTCGAGCCGTGAGACTGTACCTTCGTGAGGTTCGTGATCTGCAGTCGAAGGCAAGAGGGATTAGCTATGAGAAGAAGAAGAGGAAGCGGCCCCCGCCTCCGCCGCCGCCGCCACAACAACGACCACCAATGCCTCTCCAGCTACCTCATCATCTTCATCATCACCAATATCTCCCACCTCCAGGTGCAACTCATCAATAA 639 0.5712 MDSIQEFMDTCNSDNTGSLAHTTIAGGGGLAASSSSSASPATTSSRYENQKRRDWNTFGQYLKNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKKRKRPPPPPPPPQQRPPMPLQLPHHLHHHQYLPPPGATHQ 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1227 212 MobiDBLite consensus disorder prediction 30 50 - -
Lele08g1227 212 MobiDBLite consensus disorder prediction 164 212 - -
Lele08g1227 212 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Lele08g1227 212 MobiDBLite consensus disorder prediction 30 46 - -
Lele08g1227 212 Pfam ALOG domain 34 159 IPR006936 -
Lele08g1227 212 PANTHER PROTEIN G1-LIKE2 33 183 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1227 Lele-ChrLele08 7762759 7763538 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1227 08 7762759 7763538 Lele14g2303 14 27734899 27735429 ECH
Lele08g1227 08 7762759 7763538 Lele16g0048 16 319747 320277 ECH
Lele08g1227 08 7762759 7763538 Lele08g1227 08 7762759 7763538 ECH
Lele07g1433 07 8692199 8693379 Lele08g1227 08 7762759 7763538 ECH
Lele05g1370 05 8626707 8627888 Lele08g1227 08 7762759 7763538 hybridization
Lele06g1232 06 7798419 7800275 Lele08g1227 08 7762759 7763538 hybridization