Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1869 ATGGAACTGACTGGTCATAGAGTTATTATGAACGGGGAGAGTGAGGCAATGGACAATGAAACTTCTGCAAGCATGCCTCTAAGGCCGCGCCAAATCTACCCCGCATATCCTGCGGGCTTAGTGAAGAAGACAGCTTATATATTTGACGGCTTAGGGAATTTTTATAATAAGGAATGGGATCTAGCTGACCTTCATCAAAATAGAAAAGGAGAATCAAAGCTTGTAGATGGAAGAGGGAATGAGTTTTCTTGGTACCATGTAGAGCTCTCTAAAGATAATCAAAAATTGTCACAGTCTGCAAAAGACCTAATTGGTGTTCTTTGCCCACCATTGAAACTCCAGGACATTCTCTCTCTTGTCAGTAATGGACCATTTTGTGCCCATGTTGATGGGGCGCTTGTATTCAGGGTTAATTCACCTGGTCCTCCCACCAGTGAATTTACATTTAGGATTGCCGCTAGAGTCACAGAAAATTCAGTGATTACTGTGTCTTCGGGGCGTGTTCCCCGATTAGGTTTTTCGCGGATGGGAGAGTCTCTTCTTTCTGAGATTCCTAGCGTGGAAAGTTCCCCACATTTTGGAGATCAGCAGAAGCAGGGGAATGGTATTGTGATTAAGGAGCACGTTCTTGAATTCTTATTGACTATGAATCATTCTGAGGAAGCTGACAATCCAGTTCCCAGATCTGTCTCTTACCTTGTAGTTCATATAATTGACACGCACGTGGATCAGCTTCAAGATCTTGTAACTAAACTTGAGATGGAGTTGGACTCTGTGGAGCTTGCCTTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTTCCCAAACTGCATCTGAACTTGCAGCGTCTTCTTCAGGTGATTTCTCATGGAGAGCAAGTATTTTTACGGGTCAGAGAAAAATGCTCTTTAAAACCATGGTTTGCCAATGAAGCCATTAGCTCTCTTGAAGAACTAATTGGAAGATTAAAGAGGTTGAAGGAGAATGTTGGATTTATAGTAAGTCGTGTAACGGCAATTCAGGCAGGTCTTGACAGCTGGCAGGCTGAACAAATAAACAGGAAACTTTACTATCTTTCATTCCTTTCAATCATATTCCTCCCATTATCCATCATTACAGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACCGGCCAAAACAATCCTGAGCTCAAGGATGGTTTTCGCAATGTCATCCTACTCTGTGTTGTTATGCTACTACTCGTGCTACTTTGCTTCCTTTTCCCGGCTCTGTATACCCGTATAGCCGCATGGCGGACAAAGAACGTTCTGAGAAGAAGCTGGTCAATTAATAGGAAGTCGTTTCTCAGAAGACCTCTCCACATTGGGGATCAAGGGAGAGGAGGATACCTTCGGATTTGA 1407 0.4293 MELTGHRVIMNGESEAMDNETSASMPLRPRQIYPAYPAGLVKKTAYIFDGLGNFYNKEWDLADLHQNRKGESKLVDGRGNEFSWYHVELSKDNQKLSQSAKDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPTSEFTFRIAARVTENSVITVSSGRVPRLGFSRMGESLLSEIPSVESSPHFGDQQKQGNGIVIKEHVLEFLLTMNHSEEADNPVPRSVSYLVVHIIDTHVDQLQDLVTKLEMELDSVELALDKGGFALKKQMLDDRRFPKLHLNLQRLLQVISHGEQVFLRVREKCSLKPWFANEAISSLEELIGRLKRLKENVGFIVSRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNNPELKDGFRNVILLCVVMLLLVLLCFLFPALYTRIAAWRTKNVLRRSWSINRKSFLRRPLHIGDQGRGGYLRI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1869 468 Pfam CorA-like Mg2+ transporter protein 82 421 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele15g1869 468 Gene3D Magnesium transport protein CorA, transmembrane region 354 431 - -
Lele15g1869 468 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 421 IPR045863 -
Lele15g1869 468 SUPERFAMILY CorA soluble domain-like 52 347 IPR045861 -
Lele15g1869 468 MobiDBLite consensus disorder prediction 1 23 - -
Lele15g1869 468 Coils Coil 315 335 - -
Lele15g1869 468 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Lele15g1869 468 PANTHER OS08G0130000 PROTEIN 2 468 - -
Lele15g1869 468 Coils Coil 242 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1869 Lele-ChrLele15 11443759 11446463 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1869 15 11443759 11446463 Lele15g1869 15 11443759 11446463 ECH
Lele13g0615 13 18328888 18332429 Lele15g1869 15 11443759 11446463 hybridization
Lele14g0516 14 16858118 16861121 Lele15g1869 15 11443759 11446463 hybridization