Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0615 ATGGCCTATTGGCCTAGCAAGTTTTCAATCTACGCTAACTCAACTGTTGACCTTTTTCTGGCCATTGTCGATTTTGATATCGGTCTGGCCCTGCTAAATTATCGGTGTGCAGCGAGTTGTATTTGGATTCGGCTCCTGTATGCTCCTCCTGTATATGTTACATTTGGTCTTTATGAGCGTAAGAAGATTCTGAAAGCTTTCAATTTTGTTTCAGGGTTTAGTGACTGGTGGGGCTTGTTTGAATGTTGGGTGCCTGAGTCTGCCTTTGCCCCTTTTCAATCAACTTCTGGGTTATTTTCCATGATTGATGGTTGGCAGGATAATGTTACTTTAGAAGATATGGAATCTGGGATGTCTACGTTGTTAGAGCAAGTTATGGAACTGACTGGTCATAGAGTTATTATGAATGGGGAGAGTGAGGCAATGGAAAATGAACCTTCTGCAAGCATGCCTCTAAGGCCGCGCCAAATCTACCCCACATATCCTGCGGGCTTAGTGAAGAAGACAGCTTATATATTTGACGGCTTAGGGAATTTTTATAATAAGGAATGGGATCTAGCTGACCTTTATCAAAATAGAAAAGGAGAATCAAAGCTTGTAGATGGAAGAGGGAATGAGTTTTCTTGGTACCATGTAGAGCTCCCAAAAGATAATCAAAAATTGTCACAGTCTGCACAAGACCTAATTGGTGTTCTTTGCCCACCATTGAAACTCCAGGACATTCTCTCTCTTGTCAGTAATGGACCCTTTTGTGCACATGTTGATGGGGCGCTTGTATTCAGGGTGAATTCACCTGGTCCTCCCACCAGTGAATTTACATTTAGGATTGCCGCTAGAGTCACAAAAAATTCAGTGATTACTGTGTCTTCGGGGCGTGTTCCCCGATTAGGTTTTTCGCGGATGGGAGAGTCTCTTCTTTCTGAGATTCCTAGCGTGGAAAGTTCCCCACATTTTGGAGATCAGCAGAAGCAGGGGAATGGTATTGTGATTAAGGAGCATGTTCTTGAATTCTTATTGACTATGAATCATTCTGAGGAAGCTGACAATCCAGTTCCCAGATCTGTCTCTTACCTTGTAGTTCATATAATTGACACGCACGTGGATCAGCTTCAAGATCTTGTAACTAAACTTGAGATGGAGTTGGACTCTGTGGAGCTTGCCTTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGATAGAAGATTTCCCAAACTGCATCTGAACTTGCAGCGTCTTCTTCAGGTGATTTCTCATGGAGAGCAAGTATTTTTACGGGTCAGAGAAAAATGCTCTTTAAAACCATGGTTTGCCAATGAAGACATTAGCTCTCTTGAAGAACTAATTGGAAGATTAAAGAGGTTGAAGGAGAATGTTGGATTTATAGTAAGTCGTGTAACGGCAATTCAGGCAGGTCTTGACAGCTGGCAGGCTGAACAAATAAACAGGAAACTTTACTATCTTTCATTCCTTTCAATCATATTCCTCCCATTATCCATCATTACAGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACCGGCCAAAGCAATCCTGAGCTCAAGGATGGTTTTCGCAATGTCATCCTACTCTGTGTTGTTATGCTACTACTCGTGCTACTTTGCTTCCTTTTTCCGGCTCTGTATACCCGTATAGCCGCATGGCGGAAAAAGAACGTTCTGAGAAGAAGCTGGTCAATTAATAGGAAGTCCTTTCTGAGAAGACCTCTTCACATTGGGGATCAAGGGAGAGGAGGATACCTTCGGATTTGA 1782 0.4248 MAYWPSKFSIYANSTVDLFLAIVDFDIGLALLNYRCAASCIWIRLLYAPPVYVTFGLYERKKILKAFNFVSGFSDWWGLFECWVPESAFAPFQSTSGLFSMIDGWQDNVTLEDMESGMSTLLEQVMELTGHRVIMNGESEAMENEPSASMPLRPRQIYPTYPAGLVKKTAYIFDGLGNFYNKEWDLADLYQNRKGESKLVDGRGNEFSWYHVELPKDNQKLSQSAQDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPTSEFTFRIAARVTKNSVITVSSGRVPRLGFSRMGESLLSEIPSVESSPHFGDQQKQGNGIVIKEHVLEFLLTMNHSEEADNPVPRSVSYLVVHIIDTHVDQLQDLVTKLEMELDSVELALDKGGFALKKQMLDDRRFPKLHLNLQRLLQVISHGEQVFLRVREKCSLKPWFANEDISSLEELIGRLKRLKENVGFIVSRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQSNPELKDGFRNVILLCVVMLLLVLLCFLFPALYTRIAAWRKKNVLRRSWSINRKSFLRRPLHIGDQGRGGYLRI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0615 593 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 482 546 IPR045863 -
Lele13g0615 593 Pfam CorA-like Mg2+ transporter protein 206 546 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele13g0615 593 Coils Coil 440 460 - -
Lele13g0615 593 Gene3D Magnesium transport protein CorA, transmembrane region 479 558 - -
Lele13g0615 593 Gene3D Magnesium transport protein CorA, transmembrane region 352 478 - -
Lele13g0615 593 Coils Coil 367 387 - -
Lele13g0615 593 PANTHER OS08G0130000 PROTEIN 127 593 - -
Lele13g0615 593 SUPERFAMILY CorA soluble domain-like 171 472 IPR045861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0615 Lele-ChrLele13 18328888 18332429 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0615 13 18328888 18332429 Lele13g0615 13 18328888 18332429 ECH
Lele13g0615 13 18328888 18332429 Lele15g1869 15 11443759 11446463 hybridization
Lele13g0615 13 18328888 18332429 Lele16g1894 16 11357171 11360448 hybridization