Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0516 ATGGAACTGACTGATCATAGAGTTATTATGAATGGGGAGAGCGAGGCAATGGACAATGAGCCTTCTGCAGGCATGCCTCTGAGGCCGCGCCAAATCTACCCCACATATCCTACAGGCTTAGTGAAGAAGACAGCTTATATGTTTGACGGCTTAGGGAATTTTTATAATAAGGAATGGGATCTAGCTGACCTTCATCAAAACAGAAAAAGAGAATCAAAGCTTGTAGATGGAAGAGGTAATGAGTTTTCTTGGTACCATGTAGAGCTCCCAAAAGAAAATAAAAAATTGTCACAGTCTGCACAAGACCTAATTGGTGTTCTTTGTCCACCATTGAAACTCCAGGACATTCTCTCTCTTGTCAGTAATGGGCCCTTTTGTGCACATGTTGATGGGGCGCTTGTATTCAGGGTTAATTCACCTGGACCTCCCACCAGTGACTTTACATTTAGGATTGCTGCTAGAGTCACAGAAAATTCAGTAATTACTGTGTCTTTGGGGCGTGTTCCCCGATTAGGTTTTTCACGGATGGGAGATTCTCTTCTTTCTGAGATTCCTAGTGTGGAAAGTTCCCCTCATTTAGGAGATCAGCAGAAACAGGGGAATGGGATTGTGATTAAGGAGCATGTTCTTGAATTCTTAATAACTATGAATCATTCCGAGGAAGCTGACAATCCAGTTCCCAGATCTGTCTCAAACCTTGTAGTTCATATAATTGACACGCACGTGGATCAGCTCCAGGATCTTTTAACTAAACTTGAGATGGAGTTGGACTCTGTGGAGCTTGCCTTGGATAAAGGTGGTTTTGCTTTGAAGAAACAAATGCTAGATGACAGAAGATTTCCCAAACTGCATCTGAACTTGCAGCGTCTTCTTCAGGTGATTTCTCATGGAGAGCAAGTATTTTTACGAGTCAGAGAAAAATGCTCTTTAAAACCATGGTTTGCCAATGAAGACATTAGCTCTCTTGAAGAACTAATTGGAAGATTGAAGAGGTTGAAGGAGAATGTTGGATTTATAGTAAATCGTGTAACGGCAATTCAGGCCGGTCTTGACAGCTGGCAGGCTGAACAAATAAACAGGAAACTTTACTACCTTTCATTCCTTTCAATCATATTCCTCCCATTATCCATCATCACAGGAGTTTTTGGCATGAATGTTGGAGGAGTTCCATGGACAGGCCAAAACAATCCCGAGCTTGAGGATGGTTTTCGCAATGTCATCCTACTCTGTGTCGTTATGCTACTACTTGTGCTACTTTGCTTCCTTTTCCCGGCTCTCTATACCCGTATAGCCACATGGCGGAAAAAGAACGTTCTGGGAAGAAGTTGGTCAATTAATAGGAAGTCATTTCTCAGAAGACCTCTCCACATCGGAGATCAAGGGAGAGGAGGATACCTTCGGATTTGA 1407 0.4257 MELTDHRVIMNGESEAMDNEPSAGMPLRPRQIYPTYPTGLVKKTAYMFDGLGNFYNKEWDLADLHQNRKRESKLVDGRGNEFSWYHVELPKENKKLSQSAQDLIGVLCPPLKLQDILSLVSNGPFCAHVDGALVFRVNSPGPPTSDFTFRIAARVTENSVITVSLGRVPRLGFSRMGDSLLSEIPSVESSPHLGDQQKQGNGIVIKEHVLEFLITMNHSEEADNPVPRSVSNLVVHIIDTHVDQLQDLLTKLEMELDSVELALDKGGFALKKQMLDDRRFPKLHLNLQRLLQVISHGEQVFLRVREKCSLKPWFANEDISSLEELIGRLKRLKENVGFIVNRVTAIQAGLDSWQAEQINRKLYYLSFLSIIFLPLSIITGVFGMNVGGVPWTGQNNPELEDGFRNVILLCVVMLLLVLLCFLFPALYTRIATWRKKNVLGRSWSINRKSFLRRPLHIGDQGRGGYLRI 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0516 468 MobiDBLite consensus disorder prediction 1 29 - -
Lele14g0516 468 PANTHER OS08G0130000 PROTEIN 1 468 - -
Lele14g0516 468 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 357 421 IPR045863 -
Lele14g0516 468 Gene3D Magnesium transport protein CorA, transmembrane region 227 353 - -
Lele14g0516 468 Gene3D Magnesium transport protein CorA, transmembrane region 354 433 - -
Lele14g0516 468 SUPERFAMILY CorA soluble domain-like 57 347 IPR045861 -
Lele14g0516 468 Coils Coil 315 335 - -
Lele14g0516 468 Coils Coil 242 262 - -
Lele14g0516 468 Pfam CorA-like Mg2+ transporter protein 81 421 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0516 Lele-ChrLele14 16858118 16861121 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0516 14 16858118 16861121 Lele14g0516 14 16858118 16861121 ECH
Lele14g0516 14 16858118 16861121 Lele15g1869 15 11443759 11446463 hybridization
Lele14g0516 14 16858118 16861121 Lele16g1894 16 11357171 11360448 hybridization