Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1782 ATGATGGAGGAGAACAGTAAAAATCTGGGTGTTGTGTCCGAAGCAGAGGAATATTCCAAGGAATTGGATGTTGCCGTCAGAGCGGTTCAGATGGCTTGCTCCCTCTGCCAGAAAGTGCAGGAAAATTTGATTGTCAAGTCCACTAGTGACAGTCAGGATATTGATCATTTGGGACTCTTTCATCCTCCCGGTAAATCAGATTGGAGTGTCCAAGCAGTTGTCAGCTGGATGTTGTCTGAGTGCTTAGGAAGCAAAAATATCTCAATTCTTGCTGAAGAAGATGTTGAAACTCTCTCCAAGACTAGTTCATCTGAACTATTGGAAGCTGTGGTTAAGACTGTGAATGAATGTCTAGCTGAGGCGCCTCAATTCGGAGTTGAAGCCCCAAAATCAGCTCTTGATGCCTCTGAGGTTCTTGAAATCATCAGCCGCTGCAACTCGGTTGGTGGTCCGACGGGAAGATTCTGGGCGCTTAATCCCGTTGATGGCATGCTGGGTTTTGTACGTGGAGATCAATATGCTATAGCTCTTGCACTGATAGAGGATGGAGAAGTAATGCTTGGAGTTCTTGGTTGTCCTAACTACCCAATGAGAAAGGAATGGTTGACCTATCATCATTGGTACCATAGGATTATATCTAAGTTGACTCCTCCAACATCTGAAACTTGGGACAAAGGTTGTGTGCTGTATGCTAGAAAGGGAAGTGGCAGGGCTTGGATGCAACCACTGGTCCAGTTCAACAAGAAGTTTGTGTGGAAAGCGAGACAAGTTTCGGTTTCTTCCATCGACAATCCGGCTTTGGCAACTTTTTGTGAACCTGTTGAGAAGACAAATTCAAGCCACTCTTTCACTGAAGGACTGGCCCATAGTGTAGGTCTCAGGAAGCAGCCACTGGGAGTGTACAACATGGTGAAATATGCAGCGATAGCTCGTGGTGATGCCGAGGTTTTCATGAAGTTTCCAAGGTGTGGTTATAAGGAGAAGATATGGGATCACGCCGCCGGTGTTATCATCATACAAGAGGCGGGAGGCGTGGTGACAGATGCGGGAGGCCGTCCACTAGACTTCTCAAAAGGCGCGTATTTTGAAGGTCTGGATCGGGGAATAGTTGCTTGTGCTGGAGCCTCACTACATGAAAAGATCATAGATGCTGTTTATGCTAGCTGGAATTCATCCTGCCTTTGA 1185 0.465 MMEENSKNLGVVSEAEEYSKELDVAVRAVQMACSLCQKVQENLIVKSTSDSQDIDHLGLFHPPGKSDWSVQAVVSWMLSECLGSKNISILAEEDVETLSKTSSSELLEAVVKTVNECLAEAPQFGVEAPKSALDASEVLEIISRCNSVGGPTGRFWALNPVDGMLGFVRGDQYAIALALIEDGEVMLGVLGCPNYPMRKEWLTYHHWYHRIISKLTPPTSETWDKGCVLYARKGSGRAWMQPLVQFNKKFVWKARQVSVSSIDNPALATFCEPVEKTNSSHSFTEGLAHSVGLRKQPLGVYNMVKYAAIARGDAEVFMKFPRCGYKEKIWDHAAGVIIIQEAGGVVTDAGGRPLDFSKGAYFEGLDRGIVACAGASLHEKIIDAVYASWNSSCL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1782 394 FunFam PAP-specific phosphatase HAL2-like 16 249 - -
Lele15g1782 394 Pfam Inositol monophosphatase family 68 389 IPR000760 GO:0046855
Lele15g1782 394 ProSitePatterns Inositol monophosphatase family signature 2. 330 344 IPR020550 GO:0046854
Lele15g1782 394 Gene3D - 16 250 - -
Lele15g1782 394 PANTHER PHOSPHATASE 8 392 - -
Lele15g1782 394 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 18 392 IPR006239 GO:0006790|GO:0008441
Lele15g1782 394 FunFam PAP-specific phosphatase HAL2-like 258 391 - -
Lele15g1782 394 CDD PAP_phosphatase 21 387 - -
Lele15g1782 394 Gene3D - 258 388 - -
Lele15g1782 394 SUPERFAMILY Carbohydrate phosphatase 18 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1782 Lele-ChrLele15 10786055 10788427 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0707 13 19100694 19103141 Lele15g1782 15 10786055 10788427 CCT
Lele14g0604 14 17509750 17512931 Lele15g1782 15 10786055 10788427 CCT
Lele15g1775 15 10711793 10714293 Lele15g1782 15 10786055 10788427 CCT
Lele16g1807 16 10678528 10681385 Lele15g1782 15 10786055 10788427 CCT
Lele15g1782 15 10786055 10788427 Lele15g1782 15 10786055 10788427 ECH
Lele13g0700 13 19036048 19038501 Lele15g1782 15 10786055 10788427 hybridization
Lele14g0597 14 17449476 17452006 Lele15g1782 15 10786055 10788427 hybridization