Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1760 ATGCAAGCCGCAGAGAATCTGAGACCTGGGGATAGGTTGTTGGACATCATTGATAAAGCTGTACGAGGTTTTAAGGTTGGGGTTGCTGTGTTTTCGCCCCGTTGTTGTGAATCTTATTACTGTCTCCATGAGCTCTCACTTCTCGTGGAATCCAAGAAACGAATCGTTCCCATTTTCTGTGATGTGAAGCCGTGGGAGCTTTGGGTTAAGCAAGGCGGAATATTGAGGAGTGGTTCCCAGGAAGATCTCATGAGGTTTCATTTAGCCATTGAAGAAGCTAAATGCATTGTGGGTCTGCCCTTCGACTCCTTGAATGGTGACTGGTCGGAGCTGGTACGTAAAGCTTCAAATGCAGTGATGAGCAACTTGCATACATGA 378 0.4656 MQAAENLRPGDRLLDIIDKAVRGFKVGVAVFSPRCCESYYCLHELSLLVESKKRIVPIFCDVKPWELWVKQGGILRSGSQEDLMRFHLAIEEAKCIVGLPFDSLNGDWSELVRKASNAVMSNLHT 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1760 125 ProSiteProfiles TIR domain profile. 1 116 IPR000157 GO:0007165
Lele15g1760 125 Pfam TIR domain 5 64 IPR000157 GO:0007165
Lele15g1760 125 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 67 IPR035897 -
Lele15g1760 125 Gene3D - 1 125 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1760 Lele-ChrLele15 10603048 10603552 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1760 15 10603048 10603552 Lele13g0707 13 19100694 19103141 CCT
Lele15g1760 15 10603048 10603552 Lele14g0604 14 17509750 17512931 CCT
Lele15g1760 15 10603048 10603552 Lele15g1775 15 10711793 10714293 CCT
Lele15g1760 15 10603048 10603552 Lele16g1807 16 10678528 10681385 CCT
Lele15g1760 15 10603048 10603552 Lele15g1760 15 10603048 10603552 ECH
Lele13g0717 13 19198118 19199611 Lele15g1760 15 10603048 10603552 hybridization
Lele14g0615 14 17608120 17608512 Lele15g1760 15 10603048 10603552 hybridization