Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g0717 ATGGGATTGCATGCAAAAATTTGGCACAACGTTGCTGTGCCTGCATGCGACGTGTTCATAAACCACCGTACGGTTGATACGAGACGTACAGTGGTTCGCTTGTTGTACGACCATCTGAGGCAGCAAGGATGCAAGCCCTTCTTGGATGCAGAAAATCTGAAACCTGGAGATAGGTTGTTGGACACAATTGATAAATCTATAAGAGGTTGTAAGGTTGGGGTTACTGTCTTTTCGCCTCATTATTGTGATTCCTATTACTGTCTCCATGAGCTCTCACTTCTCGTGGAATCCAATAAACGAATCGTTCCCATTTTCTATGATGTGAAGCCGTCTCAGCTTCAGGCTAAGGAGAGTGTAATACTGAACTGTTCCCAGAAAGATCTGATGAAGTTTAATTTGGCCATTGAAGAAGCTAAATCCACAGTGGGGCTGTCCTTCGACTCCTCCAAAGATGACTGGTCGGAGCTGGTACGTAAAACTTCAAATGCAGTGATGAGGAACTTGCATGAAGAAATCAGCAGTAGTGCATGA 531 0.4444 MGLHAKIWHNVAVPACDVFINHRTVDTRRTVVRLLYDHLRQQGCKPFLDAENLKPGDRLLDTIDKSIRGCKVGVTVFSPHYCDSYYCLHELSLLVESNKRIVPIFYDVKPSQLQAKESVILNCSQKDLMKFNLAIEEAKSTVGLSFDSSKDDWSELVRKTSNAVMRNLHEEISSSA 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g0717 176 SMART till_3 15 163 IPR000157 GO:0007165
Lele13g0717 176 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 113 IPR035897 -
Lele13g0717 176 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 148 - -
Lele13g0717 176 Pfam TIR domain 17 170 IPR000157 GO:0007165
Lele13g0717 176 Gene3D - 13 173 IPR035897 -
Lele13g0717 176 ProSiteProfiles TIR domain profile. 14 164 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g0717 Lele-ChrLele13 19198118 19199611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g0717 14 164 Miscellaneous Gene Families AT1G57670 25.767 6.22e-14 66.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g0717 13 19198118 19199611 Lele13g0707 13 19100694 19103141 CCT
Lele13g0717 13 19198118 19199611 Lele14g0604 14 17509750 17512931 CCT
Lele13g0717 13 19198118 19199611 Lele15g1775 15 10711793 10714293 CCT
Lele13g0717 13 19198118 19199611 Lele16g1807 16 10678528 10681385 CCT
Lele13g0717 13 19198118 19199611 Lele13g0717 13 19198118 19199611 ECH
Lele13g0717 13 19198118 19199611 Lele15g1760 15 10603048 10603552 hybridization
Lele13g0717 13 19198118 19199611 Lele16g1795 16 10573209 10574839 hybridization