Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0615 ATGGGATTGGGTGCAAAAATTTGGCACAACATTGCTGTGCCTGCATGCGACGTGTTCATAAACCACCGTAGGGTTGACACGAGACGTACGGTGGTTCGCTTGCTGTACGACCATCTGAGGCAGCAAGGATGCAAGCCGTTCTGGGACGTTGAAAATATGAAACCTGGAGATAGGTTGTTGGACACCATTGATAAATCTATACGAGGTTGTAAGGTTGGGGTTACTGCTTTTTCGCCTCATTATTGTGATTCCTATTACTCTCTCCATGAGCTCTCACTTCTTGTGGAATCAAAGAAACGAATCGTTCCGATTTTCTACGATGTGAAGCCATCGCAGCTTCAGGGAGAGTGTAATATAGAGCTGTTCCCAGAAAGATCTGATGAAGAAGTTTAA 393 0.4504 MGLGAKIWHNIAVPACDVFINHRRVDTRRTVVRLLYDHLRQQGCKPFWDVENMKPGDRLLDTIDKSIRGCKVGVTAFSPHYCDSYYSLHELSLLVESKKRIVPIFYDVKPSQLQGECNIELFPERSDEEV 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0615 130 PANTHER TMV RESISTANCE PROTEIN N-LIKE 16 114 - -
Lele14g0615 130 Pfam TIR domain 18 122 IPR000157 GO:0007165
Lele14g0615 130 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 113 IPR035897 -
Lele14g0615 130 ProSiteProfiles TIR domain profile. 14 130 IPR000157 GO:0007165
Lele14g0615 130 SMART till_3 15 129 IPR000157 GO:0007165
Lele14g0615 130 Gene3D - 10 121 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0615 Lele-ChrLele14 17608120 17608512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0615 14 118 Miscellaneous Gene Families AT5G44920 32.727 1.49e-09 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0615 14 17608120 17608512 Lele13g0707 13 19100694 19103141 CCT
Lele14g0615 14 17608120 17608512 Lele14g0604 14 17509750 17512931 CCT
Lele14g0615 14 17608120 17608512 Lele15g1775 15 10711793 10714293 CCT
Lele14g0615 14 17608120 17608512 Lele16g1807 16 10678528 10681385 CCT
Lele14g0615 14 17608120 17608512 Lele14g0615 14 17608120 17608512 ECH
Lele14g0615 14 17608120 17608512 Lele15g1760 15 10603048 10603552 hybridization
Lele14g0615 14 17608120 17608512 Lele16g1795 16 10573209 10574839 hybridization